Pre_GI: BLASTP Hits

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Query: NC_009512:3618055:3619408 Pseudomonas putida F1, complete genome

Start: 3619408, End: 3620142, Length: 735

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:153075615307561531493738Pseudomonas putida F1, complete genomeLmbE family protein1e-123442
NC_013716:3327881:332923633292363329976741Citrobacter rodentium ICC168, complete genomeputative DNA binding protein2e-113408
NC_014974:1076565:108535210853521086062711Thermus scotoductus SA-01 chromosome, complete genomeLmbE family protein7e-51200
NC_014206:2971304:298243529824352983163729Geobacillus sp. C56-T3 chromosome, complete genomeLmbE family protein1e-36152
NC_015152:272500:276083276083276823741Spirochaeta sp. Buddy chromosome, complete genomeLmbE family protein9e-29127