Pre_GI: BLASTP Hits

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Query: NC_009512:3334579:3353480 Pseudomonas putida F1, complete genome

Start: 3353480, End: 3356089, Length: 2610

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009943:677324:6864496864496888722424Candidatus Desulfococcus oleovorans Hxd3, complete genomeexporter of the RND superfamily protein-like protein1e-36155
NC_009085:131000:1416481416481451183471Acinetobacter baumannii ATCC 17978, complete genomeRND superfamily-like exporters7e-30133
NC_017162:158289:1686061686061722563651Acinetobacter baumannii 1656-2 chromosome, complete genomeRND superfamily-like exporter7e-30133
NC_017387:147906:1585021585021620173516Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeRND superfamily exporter2e-29132
NC_017171:155836:1662971662971699473651Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeRND superfamily-like exporter1e-29132
NC_016603:3259432:3269999326999932737453747Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeexporter of the RND superfamily1e-29132
NC_010410:3777076:3781023378102337846733651Acinetobacter baumannii AYE, complete genomeputative efflux pump membrane transporter (RND superfamily)9e-30132
NC_011586:164746:1752131752131788633651Acinetobacter baumannii AB0057 chromosome, complete genomepolyketide cyclase/dehydrase family9e-30132
NC_011595:3607402:3611349361134936149993651Acinetobacter baumannii AB307-0294, complete genomepolyketide cyclase / dehydrase and lipid transport family protein9e-30132
NC_014259:3984568:3988508398850839921613654Acinetobacter sp. DR1 chromosome, complete genomeRND superfamily exporter8e-30132
NC_010611:154307:1648151648151684653651Acinetobacter baumannii ACICU, complete genomepredicted exporter of the RND superfamily4e-29130
NC_008786:3323167:3332918333291833360733156Verminephrobacter eiseniae EF01-2, complete genomeexporters of the RND superfamily-like protein5e-26120
NC_015732:91816:9181691816946892874Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein7e-25116
NC_016112:3190891:3203146320314632054372292Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein4e-1997.4
NC_007645:2533274:2548889254888925512192331Hahella chejuensis KCTC 2396, complete genomepredicted exporters of the RND superfamily4e-1584.3
NC_015578:3266855:3281834328183432844522619Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-1481.6
NC_015501:1762450:1784191178419117865812391Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein7e-1480.1
NC_019968:382991:4548694548694572502382Prevotella dentalis DSM 3688 chromosome 2, complete sequenceputative RND superfamily exporter9e-1273.2
NC_009663:946285:9629089629089651662259Sulfurovum sp. NBC37-1, complete genomeRND efflux transporter1e-1172.4
NC_014365:3123853:3136279313627931386932415Desulfarculus baarsii DSM 2075 chromosome, complete genomePatched family protein5e-1170.5
NC_012881:478042:4966324966324993162685Desulfovibrio salexigens DSM 2638, complete genomeRND efflux transporter8e-1170.1
NC_015311:1860666:1860666186066618630262361Prevotella denticola F0289 chromosome, complete genomehypothetical protein9e-1169.7
NC_008789:1641774:1653853165385316561232271Halorhodospira halophila SL1, complete genomeexporter of the RND superfamily9e-0653.1