Pre_GI: BLASTP Hits

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Query: NC_009512:3282500:3282504 Pseudomonas putida F1, complete genome

Start: 3282504, End: 3283127, Length: 624

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3282500:329950632995063300126621Pseudomonas putida F1, complete genometranscriptional regulator, TetR family5e-24110
NC_014532:2268078:226928422692842269913630Halomonas elongata DSM 2581, complete genometranscriptional regulator, TetR family7e-1270.5
NC_016887:1093609:111504211150421115686645Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator2e-1065.5
NC_017030:3771675:379248737924873793119633Corallococcus coralloides DSM 2259 chromosome, complete genomeTetR family transcriptional regulator5e-0961.2
NC_011420:3650724:365406136540613654831771Rhodospirillum centenum SW, complete genometranscriptional regulator, TetR family protein2e-0652