Pre_GI: BLASTP Hits

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Query: NC_009512:1518113:1528057 Pseudomonas putida F1, complete genome

Start: 1528057, End: 1528947, Length: 891

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:3327881:333177033317703332645876Citrobacter rodentium ICC168, complete genomeputative dehydrodgenase1e-64246
NC_014817:29795:340473404734937891Asticcacaulis excentricus CB 48 chromosome 2, complete sequencephosphogluconate dehydrogenase, nad-binding, putative-like protein5e-40164
NC_014206:2971304:298078029807802981682903Geobacillus sp. C56-T3 chromosome, complete genomephosphogluconate dehydrogenase2e-25116
NC_011892:352652:356227356227357129903Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completePhosphogluconate dehydrogenase, NAD-binding, putative-like protein5e-25115
NC_014974:1076565:108673310867331087527795Thermus scotoductus SA-01 chromosome, complete genome6-phosphogluconate dehydrogenase, NAD-binding protein5e-1685.1
NC_015563:2702787:272062327206232721474852Delftia sp. Cs1-4 chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein2e-1376.3
NC_009515:510121:528463528463529197735Methanobrevibacter smithii ATCC 35061, complete genome6-phosphogluconate dehydrogenase, beta-hydroxyacid dehydrogenase related, MmsB3e-0859.3
NC_006582:3949832:397246039724603973311852Bacillus clausii KSM-K16, complete genome3-hydroxyisobutyrate dehydrogenase6e-0755.1
NC_015519:426948:431847431847432740894Tepidanaerobacter sp. Re1 chromosome, complete genome3-hydroxyisobutyrate dehydrogenase8e-0754.7
NC_009659:892272:924458924458925354897Janthinobacterium sp. Marseille chromosome, complete genome3-hydroxyisobutyrate dehydrogenase2e-0653.9