Pre_GI: BLASTP Hits

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Query: NC_009480:739395:745338 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 745338, End: 748628, Length: 3291

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:5175649:5195919519591951991793261Thermomonospora curvata DSM 43183, complete genomeputative signal transduction protein with Nacht domain3e-111403
NC_013595:8162181:8162181816218181655013321Streptosporangium roseum DSM 43021, complete genomeNTPase (NACHT family)-like protein1e-97358
NC_015953:3782302:3794790379479037977052916Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator1e-77292
NC_021177:4221309:4231940423194042352723333Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, XRE family1e-76288
NC_007626:4038054:4040757404075740423521596Magnetospirillum magneticum AMB-1, complete genomePredicted NTPase6e-56220
NC_007626:4038054:4042343404234340441361794Magnetospirillum magneticum AMB-1, complete genomehypothetical protein7e-23110
NC_020054:4848000:4890527489052748938533327Fibrella aestuarina BUZ 2 drat genomesignal transduction protein8e-1583.6
NC_017093:2357583:2373000237300023756902691Actinoplanes missouriensis 431, complete genomeputative regulatory protein7e-1480.5
NC_015976:814922:8222668222668252352970Sphingobium sp. SYK-6, complete genomehypothetical protein2e-1378.6
NC_017186:3694:2193821938252463309Amycolatopsis mediterranei S699 chromosome, complete genomeNTPase-like protein probably invoved in signal transduction4e-1378.2
NC_014318:3691:2193821938253393402Amycolatopsis mediterranei U32 chromosome, complete genomeNTPase-like protein probably invoved in signal transduction4e-1377.8
NC_008639:1462000:1476041147604114805194479Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF3231e-1173.2
NC_015434:2438202:2447396244739624502332838Verrucosispora maris AB-18-032 chromosome, complete genomeP-loop containing NTPase9e-1170.1
NC_010571:2943369:2960150296015029639533804Opitutus terrae PB90-1, complete genomeNTPase (NACHT family)-like protein8e-1067
NC_014121:3483976:3493052349305234956492598Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0862.4
NC_014633:265086:2669082669082695712664Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceNTPase (NACHT family)7e-0757