Pre_GI: BLASTP Hits

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Query: NC_009480:1261961:1283428 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 1283428, End: 1284360, Length: 933

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014391:621062:631928631928632905978Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeabortive infection protein4e-38158
NC_008699:3516608:353994335399433540935993Nocardioides sp. JS614, complete genomeAbortive infection protein1e-1894
NC_015673:1038673:105140310514031052344942Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein5e-1168.9
NC_017337:321155:322463322463323113651Staphylococcus aureus subsp. aureus ED133 chromosome, completeCAAX amino terminal protease4e-0652.4