Pre_GI: BLASTP Hits

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Query: NC_009456:998935:1018862 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 1018862, End: 1020061, Length: 1200

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:3314309:3314941331494133161401200Shewanella sp. W3-18-1, complete genomeputative bacteriophage protein1e-85317
NC_016602:2586044:2604096260409626052831188Vibrio furnissii NCTC 11218 chromosome 1, complete sequencebacteriophage protein2e-83309
NC_008751:1736512:1753223175322317544341212Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeuncharacterized phage Mu protein GP47-like protein9e-82304
NC_013892:992811:1008583100858310097671185Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-78294
NC_009654:615504:6355866355866367401155Marinomonas sp. MWYL1, complete genomeuncharacterized phage Mu protein GP47-like protein4e-77288
NC_012440:1709416:1741999174199917431621164Persephonella marina EX-H1, complete genomehypothetical protein4e-2099.8
NC_008751:1762562:178296317829631783544582Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein2e-1687
NC_015172:2628128:2641999264199926431291131Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein5e-1582.4
NC_015172:3160249:3170746317074631718761131Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein5e-1582.4
NC_015172:2986867:2996526299652629976561131Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein5e-1582.4
NC_014483:1179286:1191720119172011928711152Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein4e-1272.8
NC_016641:2950000:2960522296052229616731152Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein5e-1169.3
NC_013406:6052913:6064990606499060661441155Paenibacillus sp. Y412MC10 chromosome, complete genomeBaseplate J family protein7e-1168.9
NC_007519:3355768:3356201335620133573641164Desulfovibrio alaskensis G20 chromosome, complete genomebaseplate assembly protein4e-0859.3