Pre_GI: BLASTP Hits

Some Help

Query: NC_009455:273519:302601 Dehalococcoides sp. BAV1 chromosome, complete genome

Start: 302601, End: 302891, Length: 291

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013552:68003:8478484784858751092Dehalococcoides sp. VS, complete genomesensor histidine kinase1e-52204
NC_013552:68003:8645486454887332280Dehalococcoides sp. VS, complete genomesensor histidine kinase1e-1374.7
NC_009455:273519:3000863000863019301845Dehalococcoides sp. BAV1 chromosome, complete genomeputative PAS/PAC sensor protein3e-1270.9
NC_007626:4038054:4054259405425940565832325Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase6e-1269.3
NC_011146:3376816:3393758339375833975973840Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-1064.7
NC_007498:357484:3768073768073805263720Pelobacter carbinolicus DSM 2380, complete genometwo component sensor histidine kinase2e-1064.7
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase2e-0961.2
NC_007356:51080:5966159661613281668Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase5e-0856.6
NC_009464:1804791:1822845182284518244011557Uncultured methanogenic archaeon RC-I, complete genomepredicted signal transduction histidine kinase6e-0856.2
NC_009850:628024:6343516343516373322982Arcobacter butzleri RM4018, complete genometwo-component sensor histidine kinase1e-0651.6
NC_014314:238043:2791912791912807111521Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completePAS/PAC sensor signal transduction histidine kinase2e-0650.8
NC_009464:2687445:2715346271534627168541509Uncultured methanogenic archaeon RC-I, complete genomepredicted signal transduction histidine kinase3e-0650.4
NC_015856:2146713:2150921215092121538752955Collimonas fungivorans Ter331 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase6e-0649.7