Pre_GI: BLASTP Hits

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Query: NC_009439:637193:655235 Pseudomonas mendocina ymp, complete genome

Start: 655235, End: 656623, Length: 1389

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:709947:7233787233787247601383Pseudomonas mendocina NK-01 chromosome, complete genomeLmbE family protein0662
NC_015556:4543380:4546790454679045481721383Pseudomonas fulva 12-X chromosome, complete genomeLmbE family protein0637
NC_009434:4140362:4140362414036241417171356Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-139494
NC_014532:2664139:2665604266560426668991296Halomonas elongata DSM 2581, complete genomehypothetical protein3e-41169