Pre_GI: BLASTP Hits

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Query: NC_009439:637193:647882 Pseudomonas mendocina ymp, complete genome

Start: 647882, End: 649027, Length: 1146

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:637193:6458526458526469701119Pseudomonas mendocina ymp, complete genomeglycosyl transferase, group 12e-25116
NC_015410:709947:7142757142757154081134Pseudomonas mendocina NK-01 chromosome, complete genomegroup 1 glycosyl transferase1e-24114
NC_015740:4072415:4083439408343940845271089Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeglycosyl transferase, group 11e-23110
NC_007947:797456:8033708033708044641095Methylobacillus flagellatus KT, complete genomeglycosyl transferase, group 19e-1685.1
NC_017506:1996652:2029817202981720309681152Marinobacter adhaerens HP15 chromosome, complete genomegroup 1 glycosyl transferase9e-1581.6
NC_014355:2775979:2787650278765027887741125Candidatus Nitrospira defluvii, complete genomeglycosyl transferase group 1 protein3e-1479.7
NC_009348:1475955:1519858151985815209521095Aeromonas salmonicida subsp. salmonicida A449, complete genomeglycosyltransferase3e-1376.3
NC_013410:3280039:3287467328746732885731107Fibrobacter succinogenes subsp. succinogenes S85 chromosome,group 1 glycosyl transferase1e-1274.3
NC_007973:2952004:2953329295332929544921164Ralstonia metallidurans CH34 chromosome 1, complete sequenceglycosyl transferase, group 12e-1170.9
NC_009483:2640403:2706130270613027072511122Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase6e-1168.9
NC_013158:1085937:1101308110130811023901083Halorhabdus utahensis DSM 12940, complete genomeglycosyl transferase group 17e-1168.6
NC_012489:652319:6654746654746665591086Gemmatimonas aurantiaca T-27, complete genomeputative glycosyltransferase1e-1067.8
NC_015944:353652:3771883771883783691182Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequencegroup 1 glycosyl transferase3e-1066.6
NC_014212:2776457:2784174278417427853071134Meiothermus silvanus DSM 9946 chromosome, complete genomeglycosyl transferase group 14e-1066.2
NC_009483:2993818:3000629300062930017501122Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase4e-0962.8
NC_008260:1015447:1027727102772710288301104Alcanivorax borkumensis SK2, complete genomeglycosyl transferase, putative5e-0962.4
NC_014355:3398033:3399173339917334003631191Candidatus Nitrospira defluvii, complete genomeputative glycosyltransferase, group 16e-0962
NC_014122:1313303:1318590131859013198011212Methanocaldococcus infernus ME chromosome, complete genomeglycosyl transferase group 11e-0861.2
NC_014550:1581812:1608847160884716105921746Arthrobacter arilaitensis Re117, complete genomeputative group 1 glycosyl transferase1e-0861.2
NC_003869:948000:9528129528129539361125Thermoanaerobacter tengcongensis MB4, complete genomepredicted glycosyltransferase2e-0860.8
NC_008313:3112440:3115441311544131165831143Ralstonia eutropha H16 chromosome 1, complete sequenceGlycosyltransferase, probably involved in lipopolysaccharide biosynthesis2e-0860.5
NC_013385:90331:9294392943940761134Ammonifex degensii KC4, complete genomeglycosyl transferase group 13e-0860.1
NC_020134:134875:1553281553281564311104Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative glycosyltransferase EpsF2e-0860.1
NC_013743:1281500:1290579129057912916971119Haloterrigena turkmenica DSM 5511, complete genomeglycosyl transferase group 13e-0859.7
NC_014122:1313303:1321568132156813228151248Methanocaldococcus infernus ME chromosome, complete genomeglycosyl transferase group 13e-0859.7
NC_015052:471944:4832554832554843911137Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase4e-0859.7
NC_003552:1397311:1408730140873014098691140Methanosarcina acetivorans C2A, complete genome1,2-diacylglycerol 3-glucosyltransferase4e-0859.7
NC_013642:400651:4214314214314225971167Thermotoga naphthophila RKU-10, complete genomeglycosyl transferase group 15e-0859.3
NC_014974:246404:2570712570712582311161Thermus scotoductus SA-01 chromosome, complete genomeglycosyltransferase4e-0859.3
NC_012032:1878854:1890061189006118912391179Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase group 15e-0858.9
NC_008618:1729739:1746433174643317475781146Bifidobacterium adolescentis ATCC 15703, complete genomecapsular polysaccharide biosynthesis proteinCps4H6e-0858.9
NC_015052:471944:4863304863304874991170Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase6e-0858.9
NC_000853:648075:6561406561406573061167Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein, putative6e-0858.9
NC_019892:6825739:6827105682710568282111107Singulisphaera acidiphila DSM 18658 chromosome, complete genomeglycosyltransferase1e-0758.2
NC_015577:1794560:1808934180893418100551122Treponema azotonutricium ZAS-9 chromosome, complete genomeglycosyltransferase1e-0757.8
NC_014910:755192:7856387856387867801143Alicycliphilus denitrificans BC chromosome, complete genomesugar transferase, pep-cterm/epsh1 system associated2e-0757.4
NC_008260:1015447:1028796102879610299531158Alcanivorax borkumensis SK2, complete genomeglycosyl transferase, group 1 family protein2e-0757
NC_017506:1996652:2026798202679820279191122Marinobacter adhaerens HP15 chromosome, complete genomeglycosyltransferase3e-0756.6
NC_013446:4723380:473546847354684736385918Comamonas testosteroni CNB-2, complete genomeglycosyl transferase, group 13e-0756.6
NC_014926:6652:5589558966591071Thermovibrio ammonificans HB-1 chromosome, complete genomeglycosyl transferase group 14e-0756.2
NC_015658:22163:4081740817419531137Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceglycosyl transferase group 14e-0756.2
NC_020209:997385:1016693101669310178351143Pseudomonas poae RE*1-1-14, complete genomeglycosyl transferase-like protein7e-0755.5
NC_014972:322056:3410483410483421841137Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase6e-0755.5
NC_020541:3156500:3212683321268332138791197Rhodanobacter sp. 2APBS1, complete genomesugar transferase, PEP-CTERM/EpsH1 system associated9e-0755.1
NC_014248:4642149:4643823464382346450941272Nostoc azollae 0708 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.3
NC_015573:1729057:1746183174618317473641182Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.3
NC_014727:1832144:1842736184273618438541119Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycosyltransferase2e-0653.9
NC_013946:2050871:2059543205954320606731131Meiothermus ruber DSM 1279 chromosome, complete genomeglycosyl transferase group 12e-0653.9
NC_008529:1634403:1645926164592616470441119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeGlycosyltransferase2e-0653.9
NC_008054:1617544:1630740163074016318581119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIH, Putative glycosyltransferase2e-0653.9
NC_011891:4931961:4941950494195049430591110Anaeromyxobacter dehalogenans 2CP-1, complete genomeglycosyl transferase group 12e-0653.5
NC_013960:3326955:3328136332813633293651230Nitrosococcus halophilus Nc4 chromosome, complete genomesugar transferase, PEP-CTERM/EpsH1 system associated3e-0653.1
NC_014656:1161188:1177854117785411789961143Bifidobacterium longum subsp. longum BBMN68 chromosome, completegroup 1 glycosyl transferase3e-0653.1
NC_019904:3072241:3086876308687630880061131Echinicola vietnamensis DSM 17526 chromosome, complete genomeglycosyltransferase5e-0652.4
NC_014355:2775979:2786417278641727875681152Candidatus Nitrospira defluvii, complete genomeputative glycosyl transferase, group 17e-0652