Pre_GI: BLASTP Hits

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Query: NC_009439:637193:647007 Pseudomonas mendocina ymp, complete genome

Start: 647007, End: 647879, Length: 873

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:709947:717119717119717991873Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein5e-99360
NC_015740:4072415:407689140768914077763873Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein6e-95347
NC_007947:797456:805348805348806217870Methylobacillus flagellatus KT, complete genomehypothetical protein1e-82306
NC_013714:2086526:209939820993982100381984Bifidobacterium dentium Bd1, complete genomehypothetical protein1e-23110
NC_014033:1633493:164749516474951648412918Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-21103
NC_014334:1954333:195536719553671956344978Lactobacillus casei str. Zhang chromosome, complete genomeEps3O6e-1478.2