Pre_GI: BLASTP Hits

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Query: NC_009439:637193:641910 Pseudomonas mendocina ymp, complete genome

Start: 641910, End: 642653, Length: 744

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:709947:710333710333711076744Pseudomonas mendocina NK-01 chromosome, complete genomelipopolysaccharide kinase2e-103375
NC_015556:4543380:456808345680834568826744Pseudomonas fulva 12-X chromosome, complete genomelipopolysaccharide kinase3e-89328
NC_015740:4072415:408772640877264088469744Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completelipopolysaccharide kinase8e-87320
NC_009434:4140362:415892941589294159633705Pseudomonas stutzeri A1501, complete genomeserine/threonine protein kinase2e-73275
NC_009434:4140362:414267541426754143355681Pseudomonas stutzeri A1501, complete genomeInaA protein9e-1787.4