Pre_GI: BLASTP Hits

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Query: NC_009439:4913767:4927523 Pseudomonas mendocina ymp, complete genome

Start: 4927523, End: 4928515, Length: 993

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012731:3193880:320182132018213202714894Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-46184
NC_012731:3193880:320396732039673204860894Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-46184
NC_012731:3193880:320289832028983203791894Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomesulfatase modifying factor 1 precursor-like protein3e-45182
NC_009648:2465613:247462924746292475522894Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomesulfatase modifying factor 1 precursor-like protein7e-45181
NC_016845:3238507:325072232507223251615894Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,sulfatase modifying factor 1 -like protein1e-44180
NC_009648:2465613:247355224735522474445894Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-44180
NC_012731:3193880:320504432050443205934891Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomesulfatase modifying factor 1 precursor-like protein3e-44179
NC_016845:3238507:324964532496453250538894Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,sulfatase modifying factor 19e-44177
NC_016845:3238507:324644632464463247018573Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,sulfatase modifying factor 16e-35148
NC_014934:2223822:224362922436292244408780Cellulophaga algicola DSM 14237 chromosome, complete genomesulphatase-modifying factor protein5e-35148
NC_014934:2223822:224282922428292243629801Cellulophaga algicola DSM 14237 chromosome, complete genomesulphatase-modifying factor protein3e-31135
NC_017506:923500:928655928655929614960Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-29129
NC_014934:2223822:224563022456302246427798Cellulophaga algicola DSM 14237 chromosome, complete genomesulphatase-modifying factor protein4e-29129
NC_014355:3248386:326707132670713267985915Candidatus Nitrospira defluvii, complete genomehypothetical protein6e-1995.1
NC_014355:139324:159667159667160629963Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-1894.4
NC_015177:981552:986616986616987614999Pedobacter saltans DSM 12145 chromosome, complete genomeprotein of unknown function DUF3233e-1789.4
NC_013939:295220:300520300520301362843Deferribacter desulfuricans SSM1, complete genomehypothetical protein9e-1787.8
NC_013730:3695674:371268337126833713549867Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF3233e-1686.3
NC_015690:5263108:527171952717195272516798Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-1686.3
NC_014355:3435343:343961634396163440473858Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-1584.3
NC_016935:5017317:502592750259275026439513Paenibacillus mucilaginosus 3016 chromosome, complete genome7e-1581.6
NC_014355:3248386:326610632661063267059954Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-1480.9
NC_014355:139324:1606941606941617521059Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1480.1
NC_015424:2316228:231868523186852319452768Aeromonas veronii B565 chromosome, complete genomehypothetical protein2e-1480.1
NC_014041:4517999:452543045254304526383954Zunongwangia profunda SM-A87 chromosome, complete genomesulfatase-modifying factor4e-1375.9
NC_008312:723456:7317607317607336251866Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-1274.7
NC_015578:3914189:391884739188473919647801Treponema primitia ZAS-2 chromosome, complete genomeserine/threonine kinase1e-1274.3
NC_019892:3366463:3367871336787133689231053Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein3e-1272.8
NC_008312:6617951:6633517663351766361052589Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function DUF3235e-1272
NC_013501:1547508:1557127155712715585541428Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF3239e-1271.2
NC_017079:1476887:1490306149030614916401335Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein1e-1170.9
NC_008312:723456:7296567296567315181863Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase3e-1169.7
NC_011770:3163480:319296531929653193819855Pseudomonas aeruginosa LESB58, complete genomePvdO3e-1169.7
NC_008576:1413778:141721014172101418058849Magnetococcus sp. MC-1, complete genomeprotein of unknown function DUF3233e-1169.7
NC_012982:1899973:1917663191766319199272265Hirschia baltica ATCC 49814, complete genomeprotein of unknown function DUF3236e-1168.6
NC_008312:723456:7338677338677357441878Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase6e-1168.6
NC_020541:2551539:2567604256760425695381935Rhodanobacter sp. 2APBS1, complete genomehypothetical protein1e-1067.8
NC_008312:723456:7359707359707378831914Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-1067.4
NC_011768:3385719:341639834163983417315918Desulfatibacillum alkenivorans AK-01, complete genomeprotein of unknown function DUF3232e-1067
NC_019972:145617:159658159658160473816Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,hypothetical protein4e-1065.9
NC_011768:3385719:341806634180663418884819Desulfatibacillum alkenivorans AK-01, complete genomeprotein of unknown function DUF3238e-1064.7
NC_008312:1600000:1619340161934016211931854Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase1e-0964.3
NC_011729:3955310:3964597396459739673742778Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein1e-0964.3
NC_013173:1356526:1402477140247714040061530Desulfomicrobium baculatum DSM 4028, complete genomeserine/threonine protein kinase2e-0963.9
NC_018876:996855:9995339995331000357825Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein2e-0963.5
NC_015578:2428500:2440214244021424417641551Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein4e-0962.4
NC_019972:145617:1456171456171470051389Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,hypothetical protein1e-0861.2
NC_013440:3947493:395595939559593956942984Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF3231e-0860.8
NC_009523:1101214:111680911168091117564756Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein3e-0859.7
NC_007626:1863747:1869435186943518709371503Magnetospirillum magneticum AMB-1, complete genomeSulfatase modifying factor 2 precursor3e-0859.3
NC_012560:2546000:255337625533762554116741Azotobacter vinelandii DJ, complete genomehypothetical protein4e-0859.3
NC_021150:2546000:255338825533882554128741Azotobacter vinelandii CA6, complete genomehypothetical protein4e-0859.3
NC_007516:774489:800339800339801196858Synechococcus sp. CC9605, complete genomehypothetical protein4e-0859.3
NC_007508:2941889:2942262294226229442471986Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein7e-0858.5
NC_006138:2630338:264828226482822648998717Desulfotalea psychrophila LSv54, complete genomehypothetical protein7e-0858.2
NC_018748:1443176:145860414586041459338735Emticicia oligotrophica DSM 17448 chromosome, complete genomeSulphatase-modifying factor protein1e-0757.8
NC_010172:573046:573046573046574023978Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF3231e-0757.4
NC_014550:3263783:326900532690053269751747Arthrobacter arilaitensis Re117, complete genomehypothetical protein2e-0757
NC_016845:3238507:324751132475113247768258Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-0756.6
NC_011884:2397248:2407435240743524108333399Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF3234e-0755.8
NC_010511:7400255:742135074213507422273924Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein4e-0755.8
NC_002967:2507993:2518825251882525211432319Treponema denticola ATCC 35405, complete genomehypothetical protein5e-0755.8
NC_015690:3477573:347757334775733478433861Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator6e-0755.5
NC_013173:1356526:1379862137986213815291668Desulfomicrobium baculatum DSM 4028, complete genomeserine/threonine protein kinase5e-0755.5
NC_015167:864525:8713628713628727021341Cellulophaga lytica DSM 7489 chromosome, complete genomegliding motility-associated lipoprotein GldK5e-0755.5
NC_021177:2309615:233682323368232337572750Streptomyces fulvissimus DSM 40593, complete genomeSerine or threonine kinase8e-0755.1
NC_014098:1670327:168067516806751681454780Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF3231e-0654.7
NC_013720:2898639:2898639289863928998291191Pirellula staleyi DSM 6068, complete genomeprotein of unknown function DUF3239e-0754.7
NC_009848:775000:779803779803780606804Bacillus pumilus SAFR-032, complete genome8e-0754.7
NC_014041:3229867:3249002324900232501321131Zunongwangia profunda SM-A87 chromosome, complete genomesulfatase-modifying factor8e-0754.7
NC_015144:545999:5552635552635567261464Weeksella virosa DSM 16922 chromosome, complete genomegliding motility-associated lipoprotein GldK2e-0653.9
NC_014364:667841:6854326854326866341203Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF3232e-0653.1
NC_012721:770651:772450772450773430981Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein4e-0652.4
NC_018748:1916012:1934091193409119353801290Emticicia oligotrophica DSM 17448 chromosome, complete genomegliding motility-associated lipoprotein GldJ6e-0652
NC_012988:769981:824567824567825550984Methylobacterium extorquens DM4, complete genomesulfatase-modifying factor like protein8e-0651.6
NC_010172:798923:849779849779850762984Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF3238e-0651.6