Pre_GI: BLASTP Hits

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Query: NC_009439:4734237:4738670 Pseudomonas mendocina ymp, complete genome

Start: 4738670, End: 4739263, Length: 594

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:6499234:650225465022546502847594Pseudomonas fluorescens F113 chromosome, complete genomeprotein SsuE3e-62238
NC_013406:3521489:356190835619083562477570Paenibacillus sp. Y412MC10 chromosome, complete genomeFMN reductase1e-30132
NC_016023:1839503:184320318432031843742540Bacillus coagulans 36D1 chromosome, complete genomeFMN reductase4e-30130
NC_019673:967559:980279980279980836558Saccharothrix espanaensis DSM 44229 complete genomeNADPH-dependent FMN reductase5e-21100
NC_016801:1422500:148635014863501487015666Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative oxidoreductase2e-1479.3
NC_016789:1432000:149005914900591490724666Corynebacterium diphtheriae PW8 chromosome, complete genomeputative oxidoreductase2e-1479.3
NC_016785:1407892:142273514227351423400666Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative oxidoreductase2e-1479
NC_016786:1359064:144483314448331445498666Corynebacterium diphtheriae HC01 chromosome, complete genomeputative oxidoreductase2e-1478.6
NC_016783:1397975:146516014651601465825666Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative oxidoreductase2e-1478.6
NC_016799:1439000:149637114963711497036666Corynebacterium diphtheriae 31A chromosome, complete genomeputative oxidoreductase3e-1478.2
NC_013174:1366786:136678613667861367460675Jonesia denitrificans DSM 20603, complete genomeNADPH-dependent FMN reductase4e-1477.8
NC_016802:1317365:142935514293551430020666Corynebacterium diphtheriae HC02 chromosome, complete genomeputative oxidoreductase7e-1477
NC_011894:5056901:508443150844315085039609Methylobacterium nodulans ORS 2060, complete genomeNADPH-dependent FMN reductase1e-1272.8
NC_010545:1781393:179916317991631799810648Corynebacterium urealyticum DSM 7109, complete genomeputative oxidoreductase2e-1272
NC_009328:3241166:325932232593223259879558Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeNADH-dependent FMN reductase3e-1271.6
NC_004193:375416:375224375224375790567Oceanobacillus iheyensis HTE831, complete genomeNADH-dependent FMN reductase3e-1271.6
NC_015376:2010009:201593820159382016516579Burkholderia gladioli BSR3 chromosome chromosome 2, completeNADPH-dependent FMN reductase5e-1270.9
NC_015673:397947:415040415040415714675Corynebacterium resistens DSM 45100 chromosome, complete genomeputative oxidoreductase5e-1270.9
NC_007974:1607500:161624016162401616833594Ralstonia metallidurans CH34 chromosome 2, complete sequenceNADPH-dependent FMN reductase2e-1169.3
NC_010557:316000:337479337479338039561Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceFMN reductase4e-1167.8
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-1167.8
NC_015954:1986705:199971119997112000292582Halophilic archaeon DL31 chromosome, complete genomeNADPH-dependent FMN reductase5e-1167.8
NC_015563:4629436:463046546304654631046582Delftia sp. Cs1-4 chromosome, complete genomeFMN reductase6e-1167.4
NC_013510:517878:538308538308538820513Thermomonospora curvata DSM 43183, complete genomeNADPH-dependent FMN reductase1e-1066.2
NC_019673:3559185:356157535615753562159585Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-1065.1
NC_011894:3988500:401210240121024012554453Methylobacterium nodulans ORS 2060, complete genome1e-0962.8
NC_009921:6447151:6467511646751164689561446Frankia sp. EAN1pec, complete genomeluciferase family protein2e-0962.4
NC_013169:2045000:206216520621652062824660Kytococcus sedentarius DSM 20547, complete genomepredicted flavoprotein5e-0960.8
NC_006087:345976:351527351527352138612Leifsonia xyli subsp. xyli str. CTCB07, complete genomeNADH-dependent FMN reductase1e-0859.7
NC_017303:1261311:126769112676911268227537Corynebacterium pseudotuberculosis I19 chromosome, complete genomeNADPH-dependent FMN reductase4e-0857.8
NC_017301:1261167:126754712675471268083537Corynebacterium pseudotuberculosis C231 chromosome, completeNADPH-dependent FMN reductase4e-0857.8
NC_017300:1258861:126524112652411265777537Corynebacterium pseudotuberculosis 1002 chromosome, completeNADPH-dependent FMN reductase4e-0857.8
NC_016781:1261300:126768012676801268216537Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeNADPH-dependent FMN reductase4e-0857.8
NC_014329:1261480:126786012678601268396537Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein4e-0857.8
NC_017305:1258840:126523812652381265756519Corynebacterium pseudotuberculosis PAT10 chromosome, completeNADPH-dependent FMN reductase4e-0857.8
NC_017031:1261289:126768712676871268205519Corynebacterium pseudotuberculosis P54B96 chromosome, completeNADPH-dependent FMN reductase4e-0857.8
NC_016932:1246235:125261512526151253151537Corynebacterium pseudotuberculosis 316 chromosome, complete genomeNADPH-dependent FMN reductase5e-0857.4