Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:4661102:4672374 Pseudomonas mendocina ymp, complete genome

Start: 4672374, End: 4672745, Length: 372

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008639:1462000:146596814659681466336369Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein5e-25112
NC_014098:2971011:297215329721532972533381Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein2e-1787.4
NC_007760:4055860:406525740652574065688432Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein1e-0961.6
NC_015684:2033985:204408320440832044487405Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein2e-0961.2
NC_017080:3712000:372484237248423725219378Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-0651.2