Pre_GI: BLASTP Hits

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Query: NC_009439:4661102:4671277 Pseudomonas mendocina ymp, complete genome

Start: 4671277, End: 4672377, Length: 1101

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014098:2971011:2971011297101129721561146Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein1e-80300
NC_008639:1462000:1466333146633314674841152Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein3e-78292
NC_017080:3712000:3723649372364937248451197Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein1e-61237
NC_016010:1247008:1259901125990112610011101Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein4e-55215
NC_007760:4055860:4065681406568140668351155Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein3e-29129
NC_007508:237771:2445832445832457941212Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein5e-26118
NC_011386:2073726:2080441208044120815681128Oligotropha carboxidovorans OM5, complete genomehypothetical protein7e-21101
NC_015684:2033985:2042942204294220440781137Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein8e-21101
NC_013205:576583:603044603044603451408Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,7e-1788.6
NC_014623:2418762:2440148244014824412901143Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesigma-70 region 2 domain-containing protein4e-1169.3