Pre_GI: BLASTP Hits

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Query: NC_009439:442890:485741 Pseudomonas mendocina ymp, complete genome

Start: 485741, End: 486895, Length: 1155

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:1668346166834616695151170Pseudomonas syringae pv. syringae B728a, complete genomeC4-dicarboxylate transporter/malic acid transport protein3e-75282
NC_004578:5192110:5208901520890152100701170Pseudomonas syringae pv. tomato str. DC3000, complete genomeC4-dicarboxylate transporter/malic acid transport protein7e-75281
NC_012660:2045398:2072409207240920735781170Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like membrane protein5e-74278
NC_014304:77715:9694096940981001161Erwinia billingiae Eb661 plasmid pEB102, complete sequenceC4-dicarboxylate transporter/malic acid transport protein4e-73275
NC_016816:4129299:4160801416080141619611161Pantoea ananatis LMG 5342, complete genomeC4-dicarboxylate transporter/malic acid transport family protein2e-72272
NC_014375:1242750:1254684125468412558801197Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein6e-72271
NC_015850:1614965:1621547162154716227071161Acidithiobacillus caldus SM-1 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein7e-58224
NC_008537:12500:1447314473156601188Arthrobacter sp. FB24 plasmid 1, complete sequenceC4-dicarboxylate transporter/malic acid transport protein9e-31134
NC_013887:1383127:1395351139535113963731023Methanocaldococcus sp. FS406-22 chromosome, complete genomeC4-dicarboxylate transporter/malic acid transport protein2e-24114
NC_021184:3149000:3166919316691931679711053Desulfotomaculum gibsoniae DSM 7213, complete genomeC4-dicarboxylate transporter/malic acid transport protein4e-22105
NC_000868:757823:7603067603067613251020Pyrococcus abyssi GE5, complete genomeC4-dicarboxylate transporter, putative9e-21101
NC_015474:1794879:1801166180116618021851020Pyrococcus sp. NA2 chromosome, complete genomeC4-dicarboxylate transporter, putative2e-1893.6
NC_014659:3654979:3677057367705736781211065Rhodococcus equi 103S, complete genomeC4-dicarboxylate transporter/malic acid transport protein4e-0652.8