Pre_GI: BLASTP Hits

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Query: NC_009439:442890:476509 Pseudomonas mendocina ymp, complete genome

Start: 476509, End: 477354, Length: 846

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:4312892:434982343498234350668846Pseudomonas poae RE*1-1-14, complete genome5,10-methylenetetrahydrofolate reductase2e-145515
NC_008260:2961291:296402029640202964847828Alcanivorax borkumensis SK2, complete genome5,10-methylenetetrahydrofolate reductase1e-98359
NC_007484:3035068:303654230365423037435894Nitrosococcus oceani ATCC 19707, complete genome5,10-methylenetetrahydrofolate reductase7e-97353
NC_015731:2039317:203931720393172040177861Nitrosomonas sp. Is79A3 chromosome, complete genome5,10-methylenetetrahydrofolate reductase2e-96352
NC_007912:556000:570731570731571624894Saccharophagus degradans 2-40, complete genome5,10-methylenetetrahydrofolate reductase (FADH)1e-86319
NC_017162:1228723:125258412525841253225642Acinetobacter baumannii 1656-2 chromosome, complete genomemetF3e-58225
NC_014618:4657719:468116946811694682059891Enterobacter cloacae SCF1 chromosome, complete genome5,10-methylenetetrahydrofolate reductase8e-57220
NC_016943:2054688:205754920575492058445897Blastococcus saxobsidens DD2, complete genome5,10-methylenetetrahydrofolate reductase1e-54213
NC_012913:280506:304856304856305740885Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein5e-53207
NC_006677:2402282:242095424209542421883930Gluconobacter oxydans 621H, complete genomeMethylenetetrahydrofolate reductase2e-50199
NC_017252:31215:501875018751065879Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,5,10-methylenetetrahydrofolate reductase4e-50198
NC_017255:31211:501855018551063879Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,5,10-methylenetetrahydrofolate reductase4e-50198
NC_017254:31206:501825018251060879Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,5,10-methylenetetrahydrofolate reductase1e-49197
NC_017253:31192:501665016651044879Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,5,10-methylenetetrahydrofolate reductase1e-49197
NC_011834:31206:501805018051058879Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,5,10-methylenetetrahydrofolate reductase1e-49197
NC_007514:1475323:149604514960451496914870Chlorobium chlorochromatii CaD3, complete genome5,10-methylenetetrahydrofolate reductase3e-47189
NC_004061:31500:502495024951127879Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome5,10-methylenetetrahydrofolate reductase2e-47189
NC_004545:15650:525775257753464888Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome5,10-methylenetetrahydrofolate reductase3e-46185
NC_011886:2369980:238887023888702389832963Arthrobacter chlorophenolicus A6, complete genomeMethylenetetrahydrofolate reductase (NAD(P)H)5e-45181
NC_016785:1586546:160062616006261601609984Corynebacterium diphtheriae CDCE 8392 chromosome, complete genome5,10-methylenetetrahydrofolate reductase3e-44179
NC_016800:1639373:165344616534461654429984Corynebacterium diphtheriae BH8 chromosome, complete genome5,10-methylenetetrahydrofolate reductase3e-44179
NC_016788:1609011:162308516230851624068984Corynebacterium diphtheriae HC04 chromosome, complete genome5,10-methylenetetrahydrofolate reductase3e-44179
NC_016790:1581411:159548415954841596467984Corynebacterium diphtheriae VA01 chromosome, complete genome5,10-methylenetetrahydrofolate reductase3e-44179
NC_016787:1605536:161960916196091620592984Corynebacterium diphtheriae HC03 chromosome, complete genome5,10-methylenetetrahydrofolate reductase2e-44179
NC_016799:1667338:168141216814121682395984Corynebacterium diphtheriae 31A chromosome, complete genome5,10-methylenetetrahydrofolate reductase1e-43176
NC_005061:647567:665107665107666003897Candidatus Blochmannia floridanus, complete genome5,10-methylenetetrahydrofolate reductase5e-43174
NC_013192:519600:521173521173522048876Leptotrichia buccalis DSM 1135, complete genome5,10-methylenetetrahydrofolate reductase2e-42172
NC_014643:1123601:1123601112360111246321032Rothia dentocariosa ATCC 17931 chromosome, complete genomemethylenetetrahydrofolate reductase (NAD(P)H)5e-42171
NC_010674:2930259:293072729307272931614888Clostridium botulinum B str. Eklund 17B, complete genome5,10-methylenetetrahydrofolate reductase2e-40166
NC_008513:13484:325393253933420882Buchnera aphidicola str. Cc (Cinara cedri), complete genome5,10-methylenetetrahydrofolate reductase3e-40165
NC_010723:2735196:273519627351962736074879Clostridium botulinum E3 str. Alaska E43, complete genome5,10-methylenetetrahydrofolate reductase3e-40165
NC_014909:662500:680874680874681770897Candidatus Blochmannia vafer str. BVAF chromosome, complete genome5,10-methylenetetrahydrofolate reductase3e-39162
NC_021182:4882494:490282249028224903703882Clostridium pasteurianum BC1, complete genome5,10-methylenetetrahydrofolate reductase8e-39160
NC_015067:998500:101977310197731020627855Bifidobacterium longum subsp. longum JCM 1217, complete genome5,10-methylenetetrahydrofolate reductase1e-38160
NC_018528:1932000:193520219352021936134933Lactobacillus helveticus R0052 chromosome, complete genomemethylenetetrahydrofolate reductase2e-37156
NC_015602:1949610:196694519669451967841897Lactobacillus kefiranofaciens ZW3 chromosome, complete genomemethylenetetrahydrofolate reductase2e-37156
NC_008346:1047500:106266710626671063530864Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete5,10-methylenetetrahydrofolate reductase3e-37155
NC_014393:139690:154943154943155800858Clostridium cellulovorans 743B chromosome, complete genome5,10-methylenetetrahydrofolate reductase6e-36151
NC_014616:1065500:108415210841521085000849Bifidobacterium bifidum S17 chromosome, complete genomeMethylenetetrahydrofolate reductase2e-35149
NC_015662:15641:344423444235194753Buchnera aphidicola (Cinara tujafilina) chromosome, complete5,10-methylene-tetrahydrofolate dehydrogenase2e-33143
NC_009633:3429972:342997234299723430856885Alkaliphilus metalliredigens QYMF chromosome, complete genomemethylenetetrahydrofolate reductase6e-31134
NC_008571:365047:386399386399387352954Gramella forsetii KT0803, complete genomemethylenetetrahydrofolate reductase2e-28126
NC_010080:1885677:188818018881801888845666Lactobacillus helveticus DPC 4571, complete genome5,10-Methylenetetrahydrofolate reductase5e-27121
NC_008529:1133665:114059211405921141257666Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete5,10-methylenetetrahydrofolate reductase1e-26120
NC_010003:335348:342709342709343656948Petrotoga mobilis SJ95, complete genomeMethylenetetrahydrofolate reductase (NAD(P)H)1e-25117
NC_014934:2482934:249315524931552494108954Cellulophaga algicola DSM 14237 chromosome, complete genomemethylenetetrahydrofolate reductase (nad(p)h)3e-25115
NC_015510:3375205:338782233878223388778957Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome5,10-methylenetetrahydrofolate reductase1e-20100