Pre_GI: BLASTP Hits

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Query: NC_009439:442890:472301 Pseudomonas mendocina ymp, complete genome

Start: 472301, End: 472402, Length: 102

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:4409683:442404844240484425028981Bordetella petrii, complete genomeISPssy, transposase2e-1064.3
NC_009434:3611738:367391936739193674452534Pseudomonas stutzeri A1501, complete genometransposase-like protein TnpA32e-1064.3
NC_009434:695582:755223755223755747525Pseudomonas stutzeri A1501, complete genometransposase-like protein TnpA33e-1064.3
NC_015740:3486226:349419034941903495170981Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDDE-type transposase3e-1063.9
NC_015740:4072415:408144040814404082420981Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDDE-type transposase3e-1063.9
NC_015740:2998500:300248530024853003465981Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDDE-type transposase3e-1063.9
NC_015740:141910:161559161559162539981Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDDE-type transposase3e-1063.9
NC_015740:3678342:368853636885363689516981Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDDE-type transposase3e-1063.9
NC_011901:2202690:222629122262912227271981Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetransposase IS4 family protein3e-1063.9
NC_010501:3671517:369740236974023698382981Pseudomonas putida W619, complete genometransposase IS4 family protein9e-1062.4
NC_005773:106000:131400131400132371972Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase3e-0960.8
NC_005773:176885:195441195441196412972Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase3e-0960.8
NC_007005:98488:106580106580107563984Pseudomonas syringae pv. syringae B728a, complete genomeTransposase, IS43e-0960.8
NC_015733:864959:888946888946889488543Pseudomonas putida S16 chromosome, complete genomeISPsy2, transposase3e-0960.8
NC_012560:3303961:331386433138643314844981Azotobacter vinelandii DJ, complete genomeTransposase, IS4 protein3e-0960.8
NC_021150:3303959:331386233138623314842981Azotobacter vinelandii CA6, complete genomeTransposase, IS4 protein3e-0960.8
NC_015733:4130000:413928241392824140265984Pseudomonas putida S16 chromosome, complete genomeISPsy2, transposase3e-0960.5
NC_015733:2720183:272968927296892730672984Pseudomonas putida S16 chromosome, complete genomeISPsy2, transposase3e-0960.5
NC_015733:864959:893984893984894967984Pseudomonas putida S16 chromosome, complete genomeISPsy2, transposase3e-0960.5
NC_005773:3253575:326036032603603260983624Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase truncated1e-0858.9
NC_012560:2451500:245651624565162457049534Azotobacter vinelandii DJ, complete genomeISPssy, transposase1e-0858.5
NC_021150:2451500:245652824565282457061534Azotobacter vinelandii CA6, complete genomeISPssy, transposase1e-0858.5
NC_005773:5636606:566003156600315661011981Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase1e-0858.5
NC_005773:2641715:265367226536722654652981Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase1e-0858.5
NC_005773:3851433:385441438544143855394981Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy2, transposase1e-0858.5
NC_004578:568236:583081583081584058978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:6334735:633980363398036340780978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2797493:280601128060112806988978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:895019:912397912397913374978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2560473:258365125836512584628978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2185907:219439021943902195367978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:4204235:421427942142794215256978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:4781326:479354247935424794519978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2671508:268519726851972686174978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:4465247:447078144707814471758978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:6334735:636006263600626361039978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:5623783:564190456419045642881978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:3241618:324983932498393250816978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2671508:267798726779872678964978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2185907:219137021913702192347978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:2560473:257783325778332578810978Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:1153738:116032511603251161155831Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0857.4
NC_004578:3597083:3601794360179436028101017Pseudomonas syringae pv. tomato str. DC3000, complete genomeISPssy, transposase3e-0857.4
NC_004578:5336773:535608853560885356525438Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0856.6
NC_010322:5349000:539094453909445391924981Pseudomonas putida GB-1 chromosome, complete genometransposase IS4 family protein2e-0754.3
NC_018080:3088866:312481031248103125790981Pseudomonas aeruginosa DK2 chromosome, complete genometransposase IS4 family protein2e-0754.3
NC_004578:895019:909819909819910748930Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0752.8
NC_015733:3595882:360469036046903605673984Pseudomonas putida S16 chromosome, complete genomeIS4, transposase2e-0651.2
NC_015733:4253961:426693142669314267914984Pseudomonas putida S16 chromosome, complete genomeIS4, transposase2e-0651.2
NC_009512:1518113:152585315258531526836984Pseudomonas putida F1, complete genometransposase, IS4 family protein2e-0651.2
NC_017986:331610:339105339105339647543Pseudomonas putida ND6 chromosome, complete genomeIS4, transposase2e-0651.2
NC_015733:3736104:376610137661013766643543Pseudomonas putida S16 chromosome, complete genomeIS4, transposase2e-0651.2
NC_020209:4943734:496124249612424962222981Pseudomonas poae RE*1-1-14, complete genometransposase2e-0651.2