Pre_GI: BLASTP Hits

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Query: NC_009439:442890:470936 Pseudomonas mendocina ymp, complete genome

Start: 470936, End: 472141, Length: 1206

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:683081:6987756987756999951221Marinobacter aquaeolei VT8, complete genomeAlkane 1-monooxygenase9e-178623
NC_008740:443274:5011495011495023721224Marinobacter aquaeolei VT8, complete genomeAlkane 1-monooxygenase1e-176619
NC_008260:3053775:3063242306324230644561215Alcanivorax borkumensis SK2, complete genomealkane 1-monooxygenase1e-174612
NC_018691:761560:7615607615607627561197Alcanivorax dieselolei B5 chromosome, complete genomeAlkane hydroxylase4e-105381
NC_008826:539835:5582685582685594701203Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencealkane-1-monooxygenase6e-105380
NC_009921:2605721:2624959262495926262211263Frankia sp. EAN1pec, complete genomeAlkane 1-monooxygenase4e-83308
NC_008463:2654014:2671834267183426729821149Pseudomonas aeruginosa UCBPP-PA14, complete genomealkane-1-monooxygenase1e-56220
NC_020829:3434736:3456847345684734579801134Pseudomonas denitrificans ATCC 13867, complete genomealkane hydroxylase7e-55214
NC_008260:125500:1304081304081315561149Alcanivorax borkumensis SK2, complete genomealkane-1-monooxygenase1e-52207
NC_008686:2080770:2101374210137421025161143Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAlkane 1-monooxygenase6e-44178
NC_016147:3023180:3031960303196030330061047Pseudoxanthomonas spadix BD-a59 chromosome, complete genomexylene monooxygenase2e-20100
NC_009512:3282500:3294184329418432953141131Pseudomonas putida F1, complete genomefatty acid desaturase8e-1685.1