Pre_GI: BLASTP Hits

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Query: NC_009439:442890:447981 Pseudomonas mendocina ymp, complete genome

Start: 447981, End: 448847, Length: 867

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:177824:1797121797121819132202Dickeya dadantii 3937 chromosome, complete genomehypothetical protein3e-39162
NC_014013:112008:1253401253401274782139Sphingobium japonicum UT26S chromosome 2, complete genomehypothetical protein7e-32137
NC_005810:4045303:4060717406071740630412325Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-30132
NC_009381:720000:7232977232977254922196Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-30132
NC_017168:144000:1473561473561495152160Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-30132