Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:4267356:4268779 Pseudomonas mendocina ymp, complete genome

Start: 4268779, End: 4269243, Length: 465

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:717993:734279734279734743465Pseudomonas fulva 12-X chromosome, complete genomebacterioferritin1e-80298
NC_002516:4747154:475166547516654752129465Pseudomonas aeruginosa PAO1, complete genomebacterioferritin2e-60231
NC_007005:5367454:538755453875545388018465Pseudomonas syringae pv. syringae B728a, complete genomeBacterioferritin1e-59228
NC_010322:583842:583842583842584306465Pseudomonas putida GB-1 chromosome, complete genomebacterioferritin1e-59228
NC_010120:1065833:107192610719261072360435Neisseria meningitidis 053442, complete genomebacterioferritin A1e-46184
NC_018679:2412000:241261624126162413083468Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completebacterioferritin6e-44176
NC_013440:6045708:605949860594986059968471Haliangium ochraceum DSM 14365, complete genomebacterioferritin5e-29126
NC_007645:3756654:377280237728023773266465Hahella chejuensis KCTC 2396, complete genomebacterioferritin1e-28125
NC_013716:4728500:474373447437344744210477Citrobacter rodentium ICC168, complete genomebacterioferritin9e-29125
NC_007645:6955479:695547969554796955958480Hahella chejuensis KCTC 2396, complete genomebacterioferritin8e-29125
NC_007946:3683371:368407736840773684553477Escherichia coli UTI89, complete genomebacterioferrin7e-29125
NC_008789:942309:960353960353960859507Halorhodospira halophila SL1, complete genomebacterioferritin3e-28124
NC_016818:362548:372959372959373438480Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completebacterioferritin8e-28122
NC_008009:4421992:444770944477094448194486Acidobacteria bacterium Ellin345, complete genomebacterioferritin1e-26119
NC_007963:3225306:322991032299103230389480Chromohalobacter salexigens DSM 3043, complete genomebacterioferritin4e-26116
NC_014909:219498:226985226985227455471Candidatus Blochmannia vafer str. BVAF chromosome, complete genomebacterioferritin1e-24112
NC_008390:2448379:246881324688132469289477Burkholderia cepacia AMMD chromosome 1, complete sequencebacterioferritin2e-24110
NC_010681:221416:237119237119237598480Burkholderia phytofirmans PsJN chromosome 1, complete sequencebacterioferritin5e-24109
NC_005061:214168:220512220512220982471Candidatus Blochmannia floridanus, complete genomebacterioferritin3e-23107
NC_004556:1933944:194289719428971943361465Xylella fastidiosa Temecula1, complete genomebacterioferritin3e-23107
NC_003902:555699:579977579977580447471Xanthomonas campestris pv. campestris str. ATCC 33913, completebacterioferritin4e-23106
NC_007086:557789:582061582061582531471Xanthomonas campestris pv. campestris str. 8004, complete genomebacterioferritin4e-23106
NC_013209:2536500:255186825518682552353486Acetobacter pasteurianus IFO 3283-01, complete genomebacterioferritin3e-22103
NC_017100:2538461:255307525530752553560486Acetobacter pasteurianus IFO 3283-03, complete genomebacterioferritin3e-22103
NC_017108:2535798:255041225504122550897486Acetobacter pasteurianus IFO 3283-12, complete genomebacterioferritin3e-22103
NC_017111:2535000:255043025504302550915486Acetobacter pasteurianus IFO 3283-32, complete genomebacterioferritin3e-22103
NC_017121:2535803:255041725504172550902486Acetobacter pasteurianus IFO 3283-07, complete genomebacterioferritin3e-22103
NC_017125:2538441:255305525530552553540486Acetobacter pasteurianus IFO 3283-22, complete genomebacterioferritin3e-22103
NC_017146:2538483:255309725530972553582486Acetobacter pasteurianus IFO 3283-26, complete genomebacterioferritin3e-22103
NC_010120:1065833:107142510714251071898474Neisseria meningitidis 053442, complete genomebacterioferritin B7e-22102
NC_016027:346768:354606354606355172567Gluconacetobacter xylinus NBRC 3288, complete genomebacterioferritin4e-21100
NC_018679:2412000:241308324130832413559477Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative glutathione-regulated potassium-efflux system protein4e-2096.7
NC_014034:995661:100107910010791001564486Rhodobacter capsulatus SB1003 chromosome, complete genomebacterioferritin9e-2095.9
NC_008536:3282971:329545332954533295992540Solibacter usitatus Ellin6076, complete genomebacterioferritin7e-1786.3