Pre_GI: BLASTP Hits

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Query: NC_009439:4267356:4267356 Pseudomonas mendocina ymp, complete genome

Start: 4267356, End: 4268624, Length: 1269

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015658:371158:3793453793453806911347Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequencepeptidase M14 carboxypeptidase A7e-1995.5
NC_012029:1604291:1604291160429116056491359Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomehypothetical protein5e-1789.4
NC_015434:1885373:1905904190590419070941191Verrucosispora maris AB-18-032 chromosome, complete genomeZinc carboxypeptidase2e-1273.6
NC_004193:701622:7053927053927069211530Oceanobacillus iheyensis HTE831, complete genomecarboxypeptidase2e-0860.5
NC_014910:1501952:1516206151620615180561851Alicycliphilus denitrificans BC chromosome, complete genomepeptidase m14 carboxypeptidase a3e-0860.1
NC_009848:775000:7918177918177934481632Bacillus pumilus SAFR-032, complete genomeM14 family carboxypeptidase8e-0755.5
NC_013222:2595315:2612381261238126135711191Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-0654.7
NC_013446:1724000:1753591175359117554681878Comamonas testosteroni CNB-2, complete genomePeptidase M14, carboxypeptidase A3e-0653.5