Pre_GI: BLASTP Hits

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Query: NC_009439:3770282:3794874 Pseudomonas mendocina ymp, complete genome

Start: 3794874, End: 3795464, Length: 591

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:2511887:251278925127892513385597Pseudomonas putida W619, complete genomeprotein of unknown function DUF11852e-103374
NC_007434:2449721:247574424757442476331588Burkholderia pseudomallei 1710b chromosome I, complete sequencePeptide synthase2e-66251
NC_015556:1188500:120156812015681202161594Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF11853e-57221
NC_018643:857911:909015909015909602588Alpha proteobacterium HIMB5 chromosome, complete genomehypothetical protein9e-57219
NC_016584:432610:442928442928443506579Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein4e-31134
NC_015519:426948:444379444379444966588Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein2e-30132
NC_014632:113420:124744124744125331588Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein3e-30131
NC_010718:2265447:226931722693172269901585Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF11852e-29128
NC_011961:304158:323584323584324174591Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencepeptide synthase8e-28123
NC_008825:404000:407048407048407602555Methylibium petroleiphilum PM1, complete genomehypothetical protein4e-22104
NC_011001:302500:319952319952320497546Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein5e-1064.3
NC_010515:1205258:121447212144721215017546Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein of unknown function DUF11852e-0962.4