Pre_GI: BLASTP Hits

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Query: NC_009439:3770282:3791718 Pseudomonas mendocina ymp, complete genome

Start: 3791718, End: 3791930, Length: 213

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:2265940:228733022873302287572243Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein4e-1683.2
NC_010943:1332243:134914913491491349412264Stenotrophomonas maltophilia K279a, complete genomeputative parB partition protein9e-1682
NC_015381:2859000:289439728943972894672276Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-1581.3
NC_003295:2787371:280800428080042808288285Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN2e-1581.3
NC_021150:3667176:366692536669253667179255Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1581.3
NC_012560:3667177:366692636669263667180255Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1581.3
NC_016147:1961000:198931719893171989586270Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-1580.9
NC_008577:1455000:147930114793011479552252Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein3e-1580.5
NC_008752:725189:748298748298748582285Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-1580.1
NC_018691:3041851:306425730642573064544288Alcanivorax dieselolei B5 chromosome, complete genomePlasmid segregation centromere-binding protein ParG2e-1477.8
NC_014910:242845:263733263733264017285Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein9e-1475.5
NC_017249:18493:438594385944125267Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0755.5
NC_004463:18497:438674386744133267Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-0755.5
NC_009668:445134:513067513067513321255Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein6e-0752.8
NC_009720:622262:654479654479654733255Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-0650.8
NC_011365:1135750:116290611629061163148243Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein3e-0650.8