Pre_GI: BLASTP Hits

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Query: NC_009439:3394174:3416692 Pseudomonas mendocina ymp, complete genome

Start: 3416692, End: 3417405, Length: 714

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:3701000:371771337177133718426714Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-126452
NC_007974:1717828:172595917259591726693735Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein1e-76285
NC_016626:1699500:169972616997261700499774Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein7e-67253
NC_008752:3684739:3685899368589936869151017Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-60233
NC_013202:906044:922401922401923246846Halomicrobium mukohataei DSM 12286, complete genomehypothetical protein2e-1996.3
NC_016610:2077603:210299521029952103840846Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein9e-1167.4
NC_014972:1126426:113341811334181134281864Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein1e-0860.1
NC_017068:1732857:174108217410821741894813Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-0860.1
NC_013929:5927935:593527859352785936138861Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-0857.4