Pre_GI: BLASTP Hits

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Query: NC_009439:3394174:3397241 Pseudomonas mendocina ymp, complete genome

Start: 3397241, End: 3399073, Length: 1833

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:3701000:3702951370295137047831833Pseudomonas mendocina NK-01 chromosome, complete genomegliding motility ABC transporter auxiliary component-like protein01062
NC_018644:637497:6374976374976393261830Alpha proteobacterium HIMB59 chromosome, complete genomeABC-type uncharacterized transport system1e-83310
NC_015500:78223:98228982281004412214Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type uncharacterized transport system3e-1377