Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2476632 Pseudomonas mendocina ymp, complete genome

Start: 2476632, End: 2477552, Length: 921

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:3384997:341506034150603415992933Janthinobacterium sp. Marseille chromosome, complete genomechromate resistance signal peptide protein6e-89327
NC_016616:1182125:118932511893251190263939Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-86320
NC_008740:3520500:353825335382533539182930Marinobacter aquaeolei VT8, complete genomechromate resistance exported protein8e-85313
NC_018080:3088866:309060730906073091551945Pseudomonas aeruginosa DK2 chromosome, complete genomechromate resistance protein5e-74278
NC_010552:58294:9983599835100812978Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechromate resistance exported protein2e-68259
NC_008391:2045348:207279120727912073768978Burkholderia cepacia AMMD chromosome 2, complete sequencechromate resistance exported protein5e-68258
NC_009254:637952:671214671214672191978Burkholderia vietnamiensis G4 chromosome 3, complete sequencechromate resistance exported protein3e-65248
NC_009256:1782000:179670817967081797619912Burkholderia vietnamiensis G4 chromosome 1, complete sequencechromate resistance exported protein1e-61236
NC_011992:1912200:191831919183191919281963Acidovorax ebreus TPSY, complete genomeputative chromate resistance protein1e-59229
NC_003296:673790:696586696586697557972Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE CHROMATE RESISTANCE SIGNAL PEPTIDE PROTEIN9e-59227
NC_020054:4161049:419729541972954198161867Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family3e-1479.3
NC_008268:3233961:325125532512553251686432Rhodococcus sp. RHA1, complete genomeprobable chromate resistance protein4e-1479
NC_010511:6756000:677888867788886779718831Methylobacterium sp. 4-46 chromosome, complete genomerhodanese domain-containing protein5e-1272
NC_008687:302450:315509315509316354846Paracoccus denitrificans PD1222 chromosome 2, complete sequenceRhodanese domain protein2e-1169.7
NC_009256:1782000:180202318020231802478456Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein1e-0964.3
NC_009254:637952:676595676595677050456Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein1e-0964.3
NC_016616:1182125:119201311920131192468456Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-0963.9
NC_003296:673790:698793698793699341549Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein4e-0859.3
NC_017904:1725180:174044717404471740983537Mycobacterium sp. MOTT36Y chromosome, complete genomechromate resistance protein1e-0757.4
NC_015572:4576778:458233645823364582836501Methylomonas methanica MC09 chromosome, complete genomeChromate resistance exported protein1e-0757.4
NC_014311:804157:826879826879827337459Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-0755.1
NC_011369:1135592:118592411859241186442519Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeChrB domain-containing protein5e-0652