Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:2427120:2473962 Pseudomonas mendocina ymp, complete genome

Start: 2473962, End: 2474663, Length: 702

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2751342:276900327690032769347345Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-26119
NC_011770:4924127:495809349580934958827735Pseudomonas aeruginosa LESB58, complete genomeTraX family protein3e-23108
NC_015379:2751342:276935627693562769712357Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-20100
NC_015949:71474:904529045291156705Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTraX family protein1e-0653.5
NC_009614:4201098:422663342266334227328696Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein3e-0652.4
NC_013192:171000:192074192074192802729Leptotrichia buccalis DSM 1135, complete genomehypothetical protein4e-0652