Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2467788 Pseudomonas mendocina ymp, complete genome

Start: 2467788, End: 2468408, Length: 621

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:2859000:286639528663952866991597Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-56217
NC_011992:1381843:138861913886191389215597Acidovorax ebreus TPSY, complete genomehypothetical protein6e-42170
NC_010725:3273261:328576132857613286354594Methylobacterium populi BJ001, complete genomehypothetical protein4e-39160
NC_009720:3377071:338298633829863383582597Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-38159
NC_012912:483390:499921499921500532612Dickeya zeae Ech1591, complete genomehypothetical protein1e-25115
NC_015850:736680:754833754833755453621Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein4e-24111
NC_013421:1744928:176396117639611764572612Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-24110
NC_008435:4530797:454048145404814541101621Rhodopseudomonas palustris BisA53, complete genomehypothetical protein7e-24110
NC_008740:443274:450549450549451154606Marinobacter aquaeolei VT8, complete genomehypothetical protein1e-23109
NC_010170:4800000:489575548957554896450696Bordetella petrii, complete genomehypothetical protein5e-1477.8
NC_020829:4429435:444915544491554449760606Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-1272.8
NC_014033:1301154:130670613067061307311606Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-1271.6
NC_015976:2900891:290901229090122909683672Sphingobium sp. SYK-6, complete genomehypothetical protein5e-1271.2
NC_013164:67500:782177821778828612Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequencehypothetical protein1e-1170.1
NC_014834:2206119:225655822565582257397840Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein5e-1167.8
NC_009720:870194:873665873665874342678Xanthobacter autotrophicus Py2, complete genomehypothetical protein5e-1167.8
NC_008782:3110744:311808631180863118799714Acidovorax sp. JS42, complete genomehypothetical protein1e-1066.6
NC_015152:272500:275003275003275635633Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein8e-1063.5
NC_008942:875060:877315877315877920606Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-0963.2
NC_013730:2359939:236952223695222370322801Spirosoma linguale DSM 74, complete genomehypothetical protein2e-0859.3
NC_015730:1799500:179982917998291800485657Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein2e-0858.9
NC_011901:1860887:189075518907551891363609Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-0753.9