Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2430113 Pseudomonas mendocina ymp, complete genome

Start: 2430113, End: 2430433, Length: 321

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1130344:113359711335971133914318Ralstonia solanacearum PSI07 megaplasmid, complete sequenceoxidoreductase cytochrome c552 signal peptide protein8e-1889
NC_003295:659837:677282677282677596315Ralstonia solanacearum GMI1000, complete genomePUTATIVE OXIDOREDUCTASE CYTOCHROME C552 PRECURSOR SIGNAL PEPTIDE PROTEIN3e-1787
NC_011000:183928:187506187506187868363Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative cytochrome c-5511e-1168.2
NC_007651:3560652:358964735896473589982336Burkholderia thailandensis E264 chromosome I, complete sequencecytochrome c family protein2e-1167.4
NC_008390:235155:238751238751239110360Burkholderia cepacia AMMD chromosome 1, complete sequencecytochrome c, class I7e-1165.9
NC_006350:3865584:388831538883153888662348Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative cytochrome c-551 precursor1e-1065.5
NC_009256:277020:278416278416278772357Burkholderia vietnamiensis G4 chromosome 1, complete sequenceclass I cytochrome c2e-1064.3
NC_015379:2575000:259170325917032592017315Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Cytochrome c-5511e-0858.5
NC_015381:252000:255843255843256199357Burkholderia gladioli BSR3 chromosome 1, complete sequenceCytochrome c family protein2e-0858.2
NC_010682:2642269:264820026482002648595396Ralstonia pickettii 12J chromosome 1, complete sequencecytochrome c class I3e-0857.4
NC_010002:3002354:302033030203303020638309Delftia acidovorans SPH-1, complete genomecytochrome c class I7e-0856.2
NC_014117:132524:133929133929134282354Burkholderia sp. CCGE1002 chromosome chromosome 1, completecytochrome c class I7e-0855.8