Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2347179 Pseudomonas mendocina ymp, complete genome

Start: 2347179, End: 2347838, Length: 660

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:308825:318605318605319333729Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1480.1
NC_021182:2536000:255336725533672554179813Clostridium pasteurianum BC1, complete genomeProtein of unknown function (DUF2971)6e-0857.8
NC_013456:1743046:176226217622621762993732Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein9e-0650.4