Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:2337024:2344869 Pseudomonas mendocina ymp, complete genome

Start: 2344869, End: 2344985, Length: 117

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:4542183:455194645519464552278333Pseudomonas aeruginosa LESB58, complete genomehypothetical protein of bacteriophage Pf16e-0752.8
NC_008463:4342119:435205443520544352431378Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein of bacteriophage Pf15e-0650.1
NC_002516:776787:789654789654790031378Pseudomonas aeruginosa PAO1, complete genomehypothetical protein of bacteriophage Pf15e-0650.1