Pre_GI: BLASTP Hits

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Query: NC_009439:1297851:1334488 Pseudomonas mendocina ymp, complete genome

Start: 1334488, End: 1334814, Length: 327

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:908904:959020959020959349330Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-1064.7
NC_018080:2288700:231721923172192317491273Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-0856.2
NC_007298:1759881:177976317797631780104342Dechloromonas aromatica RCB, complete genomehypothetical protein2e-0651.2