Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:1297851:1307124 Pseudomonas mendocina ymp, complete genome

Start: 1307124, End: 1308068, Length: 945

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:2809591:2819189281918928201961008Pseudomonas putida KT2440, complete genomehypothetical protein4e-71268
NC_015740:2407500:243722024372202437627408Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-29130
NC_015740:2407500:244017124401712440818648Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-27121
NC_014153:3084356:3101672310167231029371266Thiomonas intermedia K12 chromosome, complete genomehypothetical protein1e-24113
NC_018012:598724:6230386230386241741137Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein2e-21103
NC_017187:814940:820801820801821397597Arcobacter butzleri ED-1, complete genomehypothetical protein1e-20100
NC_005085:1269787:130985313098531310503651Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-1995.5
NC_016902:44744:5582555825568561032Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-1892.4
CP002185:4035502:4049217404921740502481032Escherichia coli W, complete genomehypothetical protein4e-1892.4
CP002516:44744:5582555825568561032Escherichia coli KO11, complete genomehypothetical protein4e-1892.4
NC_017506:1100679:111187411118741112836963Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-1789.7
NC_007298:1759881:1764277176427717654431167Dechloromonas aromatica RCB, complete genomehypothetical protein8e-1788.2
NC_008542:197500:2068952068952081031209Burkholderia cenocepacia HI2424 chromosome 1, complete sequencehypothetical protein2e-1169.7
NC_007969:2885249:288524928852492886139891Psychrobacter cryohalolentis K5, complete genomehypothetical protein4e-1168.9
NC_009138:467268:4790134790134801641152Herminiimonas arsenicoxydans, complete genomehypothetical protein9e-1167.8
NC_004431:279868:285387285387285986600Escherichia coli CFT073, complete genomehypothetical protein2e-1066.6
NC_008253:3941938:397397239739723974538567Escherichia coli 536, complete genomehypothetical protein3e-1066.2
NC_009800:349592:355726355726356325600Escherichia coli HS, complete genomehypothetical protein2e-1066.2
NC_004741:3041294:306914030691403069739600Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-1066.2
NC_004337:3049118:307696130769613077560600Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-1066.2
NC_017328:3088907:311800831180083118607600Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-1066.2
NC_015663:549425:569816569816570412597Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1065.9
NC_011083:4547825:457880445788044579370567Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-1065.9
NC_015663:1:262252622526863639Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1065.5
NC_009138:1843998:1874785187478518759151131Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-1065.5
NC_011283:4966471:500459950045995005177579Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-0964.3
NC_011750:4390000:439527743952774395843567Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-0963.9
NC_007434:3973145:4010675401067540119161242Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein2e-0963.5
NC_016147:2337244:2359609235960923608951287Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein5e-0962
NC_011415:308825:316315316315316893579Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-0962
NC_011000:1216430:1228249122824912294481200Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-0962
NC_013353:5272863:528136552813655281940576Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-0859.3
AP010958:5272863:528136552813655281940576Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-0859.3
AP010958:3853082:388325738832573883820564Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein4e-0858.9
NC_013353:3853082:388325738832573883820564Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-0858.9
NC_012917:3241196:325916132591613259742582Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein6e-0858.5
NC_011745:291422:303545303545304108564Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-0858.5
NC_020541:2769419:2778153277815327793971245Rhodanobacter sp. 2APBS1, complete genomeProtein of unknown function (DUF3296)8e-0858.2
NC_017328:1075535:108903210890321089595564Shigella flexneri 2002017 chromosome, complete genomehypothetical protein8e-0858.2
NC_011601:1114104:112681211268121127375564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0757.4
NC_010498:2278306:229595022959502296513564Escherichia coli SMS-3-5, complete genomehypothetical protein3e-0756.2
NC_004431:1119700:113536811353681135961594Escherichia coli CFT073, complete genomehypothetical protein3e-0756.2
NC_012791:721813:737961737961738605645Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein5e-0755.5
NC_007946:1073135:108878510887851089378594Escherichia coli UTI89, complete genomehypothetical protein6e-0755.1
NC_013361:1284579:129868212986821299245564Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-0755.1
NC_002655:1053082:106625810662581066821564Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-0755.1
NC_002695:1364833:137809313780931378656564Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-0755.1
NC_002655:1448605:146186514618651462428564Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-0755.1
NC_011353:1307106:132171513217151322242528Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein9e-0754.7
NC_013008:1307392:132200113220011322528528Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-0754.7
NC_013364:1257801:127193812719381272465528Escherichia coli O111:H- str. 11128, complete genomehypothetical protein9e-0754.7
NC_014618:4114004:413312841331284133709582Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-0654.3
CU928145:4950723:496683549668354967302468Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-0653.5
NC_011748:4950723:496683549668354967302468Escherichia coli 55989, complete genomehypothetical protein2e-0653.5
NC_010465:3431500:343178834317883432375588Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein3e-0652.8