Pre_GI: BLASTP Hits

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Query: NC_009439:1174432:1183089 Pseudomonas mendocina ymp, complete genome

Start: 1183089, End: 1186739, Length: 3651

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008536:5421036:5427399542739954308033405Solibacter usitatus Ellin6076, complete genomeputative signal transduction protein with Nacht domain8e-40166
NC_009767:2051203:2063058206305820660663009Roseiflexus castenholzii DSM 13941, complete genomeputative signal transduction protein with Nacht domain8e-28126
NC_020054:4848000:4890527489052748938533327Fibrella aestuarina BUZ 2 drat genomesignal transduction protein3e-22108
NC_013510:5175649:5195919519591951991793261Thermomonospora curvata DSM 43183, complete genomeputative signal transduction protein with Nacht domain3e-1998.2
NC_017186:3694:2193821938252463309Amycolatopsis mediterranei S699 chromosome, complete genomeNTPase-like protein probably invoved in signal transduction2e-1895.5
NC_014318:3691:2193821938253393402Amycolatopsis mediterranei U32 chromosome, complete genomeNTPase-like protein probably invoved in signal transduction3e-1895.1
NC_015976:814922:8222668222668252352970Sphingobium sp. SYK-6, complete genomehypothetical protein8e-1893.6
NC_008639:1462000:1476041147604114805194479Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF3235e-1791.3
NC_017093:2357583:2373000237300023756902691Actinoplanes missouriensis 431, complete genomeputative regulatory protein3e-1688.6
NC_015434:2438202:2447396244739624502332838Verrucosispora maris AB-18-032 chromosome, complete genomeP-loop containing NTPase3e-1585.5
NC_015953:3782302:3794790379479037977052916Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator6e-1584
NC_021177:4221309:4231940423194042352723333Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, XRE family1e-1379.7
NC_014633:265086:2669082669082695712664Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceNTPase (NACHT family)7e-1273.9
NC_014500:842493:8532558532558582224968Dickeya dadantii 3937 chromosome, complete genomeHEAT repeat protein4e-1171.6
NC_010571:2943369:2960150296015029639533804Opitutus terrae PB90-1, complete genomeNTPase (NACHT family)-like protein4e-1171.2
NC_007955:2281070:2283502228350222849741473Methanococcoides burtonii DSM 6242, complete genomePBS lyase HEAT-like repeat protein2e-0966.2
NC_019757:743305:7641887641887669082721Cylindrospermum stagnale PCC 7417, complete genomeputative NTPase (NACHT family)2e-0965.9
NC_015574:806762:821580821580822311732Methanobacterium sp. SWAN-1 chromosome, complete genomePBS lyase HEAT domain-containing protein repeat-containing protein3e-0965.5
NC_015574:2021300:2021300202130020226671368Methanobacterium sp. SWAN-1 chromosome, complete genomePBS lyase HEAT domain-containing protein repeat-containing protein4e-0964.7
NC_009523:4222696:4261139426113942626711533Roseiflexus sp. RS-1 chromosome, complete genomeHEAT repeat-containing PBS lyase1e-0863.2
NC_015573:1671000:1676923167692316797332811Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomePBS lyase HEAT domain-containing protein repeat-containing protein5e-0861.2
NC_010175:3712456:3712456371245637151282673Chloroflexus aurantiacus J-10-fl, complete genomeprotein of unknown function DUF3235e-0860.8
NC_017095:1757935:1762758176275817674434686Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeHEAT repeat-containing protein6e-0860.8
NC_019757:4931847:4943983494398349451191137Cylindrospermum stagnale PCC 7417, complete genomeHEAT-like repeat protein2e-0758.9
NC_008312:2798463:2821588282158828256194032Trichodesmium erythraeum IMS101, complete genomepeptidase C14, caspase catalytic subunit p201e-0656.2
NC_016114:648422:6541686541686578093642Streptomyces flavogriseus ATCC 33331 chromosome, complete genomelarge ATP-binding protein1e-0656.2
NC_015510:1234500:1243555124355512453331779Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeputative signal transduction protein with Nacht domain2e-0655.5