Pre_GI: BLASTP Hits

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Query: NC_009439:1174432:1181351 Pseudomonas mendocina ymp, complete genome

Start: 1181351, End: 1181596, Length: 246

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007963:1190847:120930412093041209591288Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein6e-2199.4
NC_011761:1155636:117717311771731177466294Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeplasmid stability protein3e-1684
NC_006576:2683467:176917692023255Synechococcus elongatus PCC 6301, complete genomepanthotenate metabolism flavoprotein8e-1372.4
NC_007604:1586243:160080216008021601053252Synechococcus elongatus PCC 7942, complete genomepanthotenate metabolism flavoprotein9e-1372.4
NC_009925:647752:669511669511669669159Acaryochloris marina MBIC11017, complete genomehypothetical protein6e-0856.2
NC_010831:2078329:211338321133832113622240Chlorobium phaeobacteroides BS1, complete genomehypothetical protein6e-0752.8
NC_009667:1371924:1394985139498513963701386Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencebifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase1e-0652.4