Pre_GI: BLASTP Hits

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Query: NC_009439:1075170:1085857 Pseudomonas mendocina ymp, complete genome

Start: 1085857, End: 1086705, Length: 849

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:926920:936719936719937561843Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTfp pilus assembly protein PilW-like protein2e-92338
NC_018080:5192264:520066752006675201482816Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein PilW4e-35148
NC_008463:5364428:537171153717115372538828Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein PilW1e-34146
NC_015410:1144272:115416711541671154889723Pseudomonas mendocina NK-01 chromosome, complete genometype 4 fimbrial biogenesis protein PilW4e-24112
NC_009434:1068281:107810310781031078840738Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilW9e-1580.9