Pre_GI: BLASTP Hits

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Query: NC_009439:1075170:1078941 Pseudomonas mendocina ymp, complete genome

Start: 1078941, End: 1079450, Length: 510

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:1144272:114709911470991147608510Pseudomonas mendocina NK-01 chromosome, complete genomelipoprotein signal peptidase6e-59226
NC_008463:5364428:537891353789135379422510Pseudomonas aeruginosa UCBPP-PA14, complete genomelipoprotein signal peptidase4e-43173
NC_018080:5192264:520785752078575208366510Pseudomonas aeruginosa DK2 chromosome, complete genomelipoprotein signal peptidase6e-43172
NC_015740:926920:929869929869930372504Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completelipoprotein signal peptidase2e-41168
NC_009434:1068281:107122410712241071727504Pseudomonas stutzeri A1501, complete genomelipoprotein signal peptidase9e-41166
NC_008260:497855:501683501683502195513Alcanivorax borkumensis SK2, complete genomesignal peptidase II6e-22103
NC_008740:979830:982649982649983170522Marinobacter aquaeolei VT8, complete genomelipoprotein signal peptidase2e-2098.2
NC_017501:1913360:193454219345421935048507Neisseria meningitidis 8013, complete genomelipoprotein signal peptidase (prolipoprotein signal peptidase; signal peptidase II; SPase II)4e-2097.4
NC_013016:354000:354263354263354790528Neisseria meningitidis alpha14 chromosome, complete genomelipoprotein signal peptidase4e-2097.4
NC_017517:1915842:193649119364911936988498Neisseria meningitidis M01-240355 chromosome, complete genomesignal peptidase II1e-1995.5
NC_010995:3821327:383975938397593840271513Cellvibrio japonicus Ueda107, complete genomesignal peptidase II4e-1890.9
NC_007645:6049340:606665060666506067189540Hahella chejuensis KCTC 2396, complete genomelipoprotein signal peptidase5e-1787
NC_010410:3886500:389167738916773892207531Acinetobacter baumannii AYE, complete genomeprolipoprotein signal peptidase (Signal peptidase II.)8e-1786.3
NC_010611:31976:471434714347673531Acinetobacter baumannii ACICU, complete genomeLipoprotein signal peptidase8e-1786.3
NC_014532:349384:371608371608372231624Halomonas elongata DSM 2581, complete genomelipoprotein signal peptidase2e-1685.1
NC_011901:3363500:336757233675723368063492Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelipoprotein signal peptidase2e-1582
NC_017506:93494:991439914399658516Marinobacter adhaerens HP15 chromosome, complete genomelipoprotein signal peptidase2e-1582
NC_015424:3890293:390586739058673906364498Aeromonas veronii B565 chromosome, complete genomelipoprotein signal peptidase2e-1581.6
NC_017033:2758582:278088327808832781365483Frateuria aurantia DSM 6220 chromosome, complete genomelipoprotein signal peptidase8e-1579.7
NC_008740:3602367:361601036160103616525516Marinobacter aquaeolei VT8, complete genomelipoprotein signal peptidase2e-1478.6
NC_010943:1332243:137363713736371374161525Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane signal peptidase4e-1477.4
NC_011663:3818886:383536738353673835882516Shewanella baltica OS223 chromosome, complete genomelipoprotein signal peptidase1e-1375.5
NC_009665:1332751:133655113365511337066516Shewanella baltica OS185 chromosome, complete genomelipoprotein signal peptidase1e-1375.5
NC_009052:1211989:121741412174141217929516Shewanella baltica OS155, complete genomelipoprotein signal peptidase1e-1375.5
NC_016901:1367443:137286813728681373383516Shewanella baltica OS678 chromosome, complete genomelipoprotein signal peptidase4e-1374.3
NC_009997:1368471:137227113722711372786516Shewanella baltica OS195, complete genomelipoprotein signal peptidase4e-1374.3
NC_008700:1115436:111924511192451119751507Shewanella amazonensis SB2B, complete genomeSignal peptidase II4e-1373.9
NC_007508:1446526:144943614494361449954519Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomesignal peptidase II2e-1271.6
NC_014394:2228470:223129422312942231770477Gallionella capsiferriformans ES-2 chromosome, complete genomelipoprotein signal peptidase5e-1167
NC_011283:4767269:478501647850164785516501Klebsiella pneumoniae 342 chromosome, complete genomelipoprotein signal peptidase2e-0961.6
NC_013850:4612812:463055946305594631059501Klebsiella variicola At-22 chromosome, complete genomelipoprotein signal peptidase2e-0961.6
NC_002528:148274:156163156163156645483Buchnera aphidicola str. APS (Acyrthosiphon pisum), completelipoprotein signal peptidase3e-0961.2
NC_011834:156197:156197156197156679483Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_017252:155166:156191156191156673483Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_017253:155170:156194156194156676483Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_017254:156215:156215156215156697483Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_017255:156195:156195156195156677483Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_011833:147426:156181156181156663483Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,lipoprotein signal peptidase3e-0961.2
NC_016632:170000:200233200233200706474Serratia symbiotica str. 'Cinara cedri' chromosome, completelipoprotein signal peptidase1e-0859.3
NC_010468:3970995:397252139725213973015495Escherichia coli ATCC 8739, complete genomelipoprotein signal peptidase1e-0858.9
CU928160:11381:271562715627650495Escherichia coli IAI1 chromosome, complete genomeprolipoprotein signal peptidase (signal peptidase II)1e-0858.9
NC_011748:11394:271682716827662495Escherichia coli 55989, complete genomelipoprotein signal peptidase1e-0858.9
CU928145:11394:271682716827662495Escherichia coli 55989 chromosome, complete genomeprolipoprotein signal peptidase (signal peptidase II)1e-0858.9
NC_009800:12162:285032850328997495Escherichia coli HS, complete genomesignal peptidase II1e-0858.9
AP010958:12660:284342843428928495Escherichia coli O103:H2 str. 12009 DNA, complete genomeprolipoprotein signal peptidase1e-0858.9
NC_011751:12000:295652956530059495Escherichia coli UMN026 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
CP002185:11921:284352843528929495Escherichia coli W, complete genomeprolipoprotein signal peptidase (signal peptidase II)1e-0858.9
NC_009801:11921:284222842228916495Escherichia coli E24377A, complete genomesignal peptidase II1e-0858.9
NC_011750:12047:334183341833912495Escherichia coli IAI39 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
CP002516:4081484:408297340829734083467495Escherichia coli KO11, complete genomelipoprotein signal peptidase1e-0858.9
NC_011415:11381:271542715427648495Escherichia coli SE11 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_011741:11381:271562715627650495Escherichia coli IAI1 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_012967:12161:292792927929773495Escherichia coli B str. REL606 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_012947:3753375:375394937539493754443495Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipoprotein signal peptidase1e-0858.9
NC_013941:12000:296002960030094495Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_013008:11938:296192961930113495Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_011353:12000:296192961930113495Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_002695:12000:296182961830112495Escherichia coli O157:H7 str. Sakai, complete genomesignal peptidase II1e-0858.9
NC_002655:12000:296192961930113495Escherichia coli O157:H7 EDL933, complete genomesignal peptidase II1e-0858.9
NC_016902:4081484:408297340829734083467495Escherichia coli KO11FL chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_013364:11382:271502715027644495Escherichia coli O111:H- str. 11128, complete genomeprolipoprotein signal peptidase1e-0858.9
NC_013361:11382:271652716527659495Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipoprotein signal peptidase1e-0858.9
NC_013353:12660:284342843428928495Escherichia coli O103:H2 str. 12009, complete genomeprolipoprotein signal peptidase1e-0858.9
NC_007384:16500:323733237332867495Shigella sonnei Ss046, complete genomeprolipoprotein signal peptidase3e-0857.8
NC_016822:15401:315933159332087495Shigella sonnei 53G, complete genomelipoprotein signal peptidase3e-0857.8
NC_017256:144854:156278156278156754477Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,lipoprotein signal peptidase1e-0652.8
NC_020409:393329:410728410728411216489Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeLipoprotein signal peptidase5e-0650.4
NC_015458:1938860:194657219465721946790219Pusillimonas sp. T7-7 chromosome, complete genomelipoprotein signal peptidase9e-0649.7