Pre_GI: BLASTP Hits

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Query: NC_009439:101174:115947 Pseudomonas mendocina ymp, complete genome

Start: 115947, End: 116483, Length: 537

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012997:2405500:240862624086262409273648Teredinibacter turnerae T7901, complete genomehypothetical protein8e-1889.7
NC_014414:2467639:247441724744172475046630Parvularcula bermudensis HTCC2503 chromosome, complete genomelipoprotein, putative3e-1684.3
NC_014541:1414627:143130114313011431810510Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein8e-1683.2
NC_015730:921735:942860942860943513654Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein3e-1271.2
NC_009952:2381601:241385724138572414513657Dinoroseobacter shibae DFL 12, complete genomehypothetical protein5e-0960.8
NC_016631:4384251:438425143842514384676426Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein6e-0960.1