Pre_GI: BLASTP Hits

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Query: NC_009439:101174:115461 Pseudomonas mendocina ymp, complete genome

Start: 115461, End: 115928, Length: 468

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:2397255:242079524207952421256462Pseudomonas entomophila L48, complete genomehypothetical protein1e-43175
NC_018080:5070687:508641350864135086853441Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-36150
NC_009656:5297000:531515153151515315627477Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-36149
NC_020829:1068438:106886610688661069324459Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein5e-33139
NC_009850:413093:436428436428436883456Arcobacter butzleri RM4018, complete genomeconserved hypothetical protein7e-1579.7
NC_014762:2428721:245825724582572458715459Sulfuricurvum kujiense DSM 16994 chromosome, complete genomehypothetical protein9e-1475.9
NC_014935:769305:786544786544787080537Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein2e-1375.1