Pre_GI: BLASTP Hits

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Query: NC_009438:2939478:2959508 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 2959508, End: 2959861, Length: 354

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:1523323:152597715259771526330354Shewanella sp. MR-4, complete genomeS23 ribosomal protein1e-55214
NC_008322:1595500:160153616015361601889354Shewanella sp. MR-7, complete genomeS23 ribosomal protein2e-55213
NC_010506:2046000:204899920489992049376378Shewanella woodyi ATCC 51908, complete genomeS23 ribosomal protein2e-47187
NC_008345:3394154:340174634017463402129384Shewanella frigidimarina NCIMB 400, complete genomeS23 ribosomal protein3e-45180
NC_008700:2701500:272696427269642727350387Shewanella amazonensis SB2B, complete genomeS23 ribosomal7e-34142
NC_014532:1579419:158329315832931583646354Halomonas elongata DSM 2581, complete genomehypothetical protein2e-30130
NC_009901:1693500:169758916975891697948360Shewanella pealeana ATCC 700345, complete genomeS23 ribosomal protein5e-30129
NC_010334:1783500:178638017863801786775396Shewanella halifaxensis HAW-EB4, complete genomeS23 ribosomal protein7e-30129
NC_007954:3171081:320178832017883202183396Shewanella denitrificans OS217, complete genomeS23 ribosomal7e-30129
NC_012997:1446037:144856214485621448921360Teredinibacter turnerae T7901, complete genomehypothetical protein1e-29128
NC_014803:475355:495520495520495864345Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein4e-28123
NC_014394:1373602:137939213793921379772381Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-25114
NC_011901:2914000:292823429282342928590357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-24110
NC_005139:343500:345316345316345687372Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein6e-23106
NC_013959:2892660:292553729255372925911375Sideroxydans lithotrophicus ES-1 chromosome, complete genomeS23 ribosomal protein4e-1580.1
NC_010831:2078329:211085321108532111221369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein7e-1579.3
NC_010831:2078329:210598721059872106355369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein1e-1478.6
NC_010831:2078329:210208521020852102453369Chlorobium phaeobacteroides BS1, complete genomeS23 ribosomal protein1e-1478.6
NC_010803:2067539:210797921079792108347369Chlorobium limicola DSM 245, complete genomeS23 ribosomal protein2e-1477.8
NC_008639:2968000:299543929954392995807369Chlorobium phaeobacteroides DSM 266, complete genomeS23 ribosomal protein2e-1477.8
NC_013522:1538994:156347115634711563845375Thermanaerovibrio acidaminovorans DSM 6589, complete genomeS23 ribosomal protein9e-1475.5
NC_010730:952574:961458961458961814357Sulfurihydrogenibium sp. YO3AOP1, complete genomeS23 ribosomal protein1e-1374.7
NC_013740:660880:678247678247678612366Acidaminococcus fermentans DSM 20731, complete genomeS23 ribosomal protein5e-1373.2
NC_009483:4434375:447088444708844471255372Geobacter uraniireducens Rf4 chromosome, complete genomeS23 ribosomal protein6e-1269.3
NC_015672:399522:406322406322406681360Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein8e-1268.9
NC_011979:1590432:159420515942051594585381Geobacter sp. FRC-32, complete genomeS23 ribosomal protein1e-1168.6
NC_013173:2884887:293016129301612930508348Desulfomicrobium baculatum DSM 4028, complete genomeS23 ribosomal protein6e-1166.2
NC_015388:1913118:193235519323551932735381Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeS23 ribosomal protein8e-1165.9
NC_012997:1446037:144806914480691448248180Teredinibacter turnerae T7901, complete genomehypothetical protein8e-1165.9
NC_020050:296702:310734310734311084351Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialS23 ribosomal protein2e-1064.7
NC_009483:4434375:446040544604054460776372Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-1063.5
NC_015672:399522:404152404152404514363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein4e-1063.5
NC_008346:800500:801484801484801876393Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein4e-1063.2
NC_019978:2260395:227383322738332274183351Halobacteroides halobius DSM 5150, complete genomeS23 ribosomal protein5e-1063.2
NC_013791:1291339:130680313068031307159357Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein8e-1062.4
NC_019978:2260395:226532522653252265675351Halobacteroides halobius DSM 5150, complete genomeS23 ribosomal protein2e-0961.2
NC_013791:1291339:130440013044001304756357Bacillus pseudofirmus OF4 chromosome, complete genomeS23 ribosomal2e-0961.2
NC_013740:842841:850155850155850508354Acidaminococcus fermentans DSM 20731, complete genomeS23 ribosomal protein2e-0961.2
NC_015958:2206032:222026422202642220662399Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeS23 ribosomal protein4e-0960.1
NC_014933:3715467:372722337272233727594372Bacteroides helcogenes P 36-108 chromosome, complete genomeS23 ribosomal protein5e-0959.7
NC_009483:4434375:446758944675894467945357Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein2e-0857.8
NC_008009:5139896:517351851735185173901384Acidobacteria bacterium Ellin345, complete genomeS23 ribosomal2e-0857.8
NC_009767:997500:102362810236281024056429Roseiflexus castenholzii DSM 13941, complete genomeS23 ribosomal protein4e-0857
NC_014758:1207894:122541412254141225845432Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein5e-0856.6
NC_003272:637970:643318643318643719402Nostoc sp. PCC 7120, complete genomehypothetical protein7e-0855.8
NC_013223:724394:771073771073771333261Desulfohalobium retbaense DSM 5692, complete genome4e-0753.5
NC_015672:399522:408139408139408501363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS23 ribosomal protein6e-0752.8