Pre_GI: BLASTP Hits

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Query: NC_009438:212476:215929 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 215929, End: 216621, Length: 693

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:2332000:2339787233978723409591173Shewanella sp. W3-18-1, complete genomecointegrate resolution protein T7e-97353
NC_009659:1923925:1965881196588119668821002Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein T2e-0962.8
NC_009138:1583988:1598232159823215992811050Herminiimonas arsenicoxydans, complete genomeputative Cointegrate resolution protein T3e-0962.4
NC_009138:1518315:1528429152842915294511023Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (cointegrate resolution protein T)1e-0859.7
NC_010170:3944228:397218139721813972951771Bordetella petrii, complete genomehypothetical protein2e-0755.8
NC_009659:1984980:198997719899771990795819Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein T2e-0755.8
NC_009659:1984980:1988793198879319898271035Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein T5e-0754.7
NC_017986:5867782:5869312586931258703641053Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0652
NC_011662:2320100:2365386236538623664741089Thauera sp. MZ1T, complete genomecointegrate resolution protein T7e-0650.8