Pre_GI: BLASTP Hits

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Query: NC_009140:121107:144227 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 144227, End: 144592, Length: 366

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008341:29038:410414104141406366Nitrosomonas eutropha C91 plasmid1, complete sequencetranscriptional regulator, MerR family2e-43174
NC_008344:1364142:137293913729391373304366Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein2e-43174
NC_017986:1862408:187973318797331880098366Pseudomonas putida ND6 chromosome, complete genometranscriptional regulator MerD5e-43172
NC_016616:2644883:264678826467882647153366Dechlorosoma suillum PS chromosome, complete genomemercuric resistance transcriptional repressor protein MerD5e-43172
NC_015733:5909821:593045859304585930823366Pseudomonas putida S16 chromosome, complete genometranscriptional regulator MerD1e-42171
NC_015740:1291739:129550412955041295869366Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranscriptional regulator MerD1e-42171
NC_010501:2609567:261078626107862611151366Pseudomonas putida W619, complete genomemercuric resistence transcriptional repressor, MerD, MerR family1e-42171
NC_008463:1293079:130832013083201308685366Pseudomonas aeruginosa UCBPP-PA14, complete genomeMercuric resistence transcriptional repressor protein MerD1e-42171
NC_008573:195317:232097232097232462366Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, MerR family2e-42170
NC_003384:109036:117909117909118274366Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric resistance operon coregulator2e-42170
NC_010410:3606826:364757136475713647969399Acinetobacter baumannii AYE, complete genomeHTH-type transcriptional regulator (Mercuric resistance protein merD)4e-42169
NC_004757:905417:916254916254916619366Nitrosomonas europaea ATCC 19718, complete genomeBacterial regulatory proteins, MerR family1e-36151
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete9e-33138
NC_003384:157158:171595171595171957363Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric resistance operon coregulator2e-32137
NC_009349:78000:855208552085882363Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetranscriptional regulator MerD2e-32137
NC_011992:2279752:228193822819382282300363Acidovorax ebreus TPSY, complete genomemercuric resistence transcriptional repressor, MerD, MerR family2e-32137
NC_013365:92973:102554102554102916363Escherichia coli O111:H- str. 11128 plasmid pO111_1, completetranscriptional regulator MerD2e-32137
NC_016860:4055117:408546740854674085829363Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional regulator MerD2e-32137
NC_008344:1:327213272132966246Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein9e-29125