Pre_GI: BLASTP Hits

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Query: NC_009092:521519:539397 Shewanella loihica PV-4, complete genome

Start: 539397, End: 540563, Length: 1167

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:3887648:3912206391220639133451140Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane protein6e-52205
NC_014228:3591758:3591758359175835929091152Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein; putative exported protein2e-51203
NC_006347:3843228:3868577386857738697971221Bacteroides fragilis YCH46, complete genomehypothetical protein2e-38160
NC_011026:2533017:2534766253476625359261161Chloroherpeton thalassium ATCC 35110, complete genomeOuter membrane protein/protective antigen OMA87-like protein2e-22107
NC_014836:1108919:1108919110891911100251107Desulfurispirillum indicum S5 chromosome, complete genomesurface antigen (D15)1e-1584.7
NC_016148:576946:5820215820215838021782Thermovirga lienii DSM 17291 chromosome, complete genomesurface antigen (D15)2e-0963.9