Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:3732390:3743787 Shewanella loihica PV-4, complete genome

Start: 3743787, End: 3744224, Length: 438

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010505:1581429:158082415808241581432609Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, MarR family6e-22102
NC_012587:3177583:317848531784853178961477Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, MarR family9e-1889
NC_007508:141891:160354160354160842489Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, MarR family1e-1685.1
NC_016010:137658:157456157456157944489Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeMarR family transcriptional regulator3e-1684
NC_015381:1623587:167402516740251674294270Burkholderia gladioli BSR3 chromosome 1, complete sequenceMarR family transcriptional regulator1e-0961.6
NC_017098:2562131:256861225686122569043432Spirochaeta africana DSM 8902 chromosome, complete genometranscriptional regulator4e-0650.1