Pre_GI: BLASTP Hits

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Query: NC_009092:3239500:3255170 Shewanella loihica PV-4, complete genome

Start: 3255170, End: 3257326, Length: 2157

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3232000:3236452323645232386142163Shewanella sp. MR-4, complete genomeTPR repeat-containing protein2e-136486
NC_008312:4358134:4363322436332243656702349Trichodesmium erythraeum IMS101, complete genomeTetratricopeptide TPR_23e-0964.3
NC_008312:4358134:4358134435813443610912958Trichodesmium erythraeum IMS101, complete genomeTetratricopeptide TPR_22e-0758.2
NS_000195:219785:2663432663432702273885Candidatus Cloacamonas acidaminovoranshypothetical protein1e-0655.8
NC_011296:1821244:1830831183083118340013171Thermodesulfovibrio yellowstonii DSM 11347, complete genometetratricopeptide repeat domain protein3e-0654.7
NC_015161:354000:3710243710243736242601Deinococcus proteolyticus MRP chromosome, complete genomediguanylate cyclase/phosphodiesterase8e-0653.1