Pre_GI: BLASTP Hits

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Query: NC_009092:3057319:3068762 Shewanella loihica PV-4, complete genome

Start: 3068762, End: 3069088, Length: 327

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013959:1059004:109850610985061098847342Sideroxydans lithotrophicus ES-1 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-27120
NC_013194:4034854:404892140489214049262342Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein3e-26117
NC_012856:3615550:362244336224433622766324Ralstonia pickettii 12D chromosome 1, complete genomeProtein-tyrosine phosphatase, low molecular weight9e-23105
NC_003295:3688000:475747575080324Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-22105
NC_007413:4278252:429204642920464292375330Anabaena variabilis ATCC 29413, complete genomehypothetical protein4e-2199.8
NC_008027:3844355:388092338809233881255333Pseudomonas entomophila L48, complete genomehypothetical protein3e-1993.6
NC_008571:744500:756606756606756974369Gramella forsetii KT0803, complete genomephosphotyrosine protein phosphatase2e-1168.2