Pre_GI: BLASTP Hits

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Query: NC_009092:3057319:3065659 Shewanella loihica PV-4, complete genome

Start: 3065659, End: 3065994, Length: 336

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016935:2567039:259772725977272598050324Paenibacillus mucilaginosus 3016 chromosome, complete genomeHxlR family transcriptional regulator8e-0752.4
NC_014540:2828299:283131528313152831683369Burkholderia sp. CCGE1003 chromosome 2, complete sequenceHxlR family transcriptional regulator1e-0652
NC_002939:173833:193093193093193437345Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-0650.8
NC_015957:2781740:280061128006112800961351Streptomyces violaceusniger Tu 4113 chromosome, complete genomeHxlR family transcriptional regulator3e-0650.8
NC_012914:5194791:519589351958935196207315Paenibacillus sp. JDR-2, complete genometranscriptional regulator, HxlR family4e-0650.1