Pre_GI: BLASTP Hits

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Query: NC_009092:1989977:2009066 Shewanella loihica PV-4, complete genome

Start: 2009066, End: 2009314, Length: 249

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010334:2749250:275249827524982752746249Shewanella halifaxensis HAW-EB4, complete genomehydrogenase assembly chaperone hypC/hupF9e-29125
NC_009901:2427291:245144324514432451691249Shewanella pealeana ATCC 700345, complete genomehydrogenase assembly chaperone hypC/hupF2e-27120
NC_007575:1484305:149430414943041494594291Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/formation protein (HUPF/HYPC)9e-2198.6
NC_017192:1841987:185479118547911855072282Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypC7e-1889.4
NC_015587:28997:459104591046149240Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase assembly chaperone hypC/hupF7e-1062.8
NC_015557:30622:458744587446113240Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF7e-1062.8
NC_020411:28995:459084590846147240Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein HypC7e-1062.8
NC_004463:1898648:1898648189864819003931746Bradyrhizobium japonicum USDA 110, complete genomehydrogenase maturation protein4e-0960.1
NC_010336:852915:864108864108864323216Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein (HUPF/HYPC)8e-0959.3
NC_017273:352150:372604372604372873270Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase assembly chaperone HypC/HupF5e-0856.6
NC_008340:2272692:228972322897232289950228Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase assembly chaperone hypC/hupF4e-0856.6
NC_011666:3001513:301991130199113020159249Methylocella silvestris BL2, complete genomehydrogenase assembly chaperone hypC/hupF3e-0754.3
NC_009720:2424975:244490824449082445207300Xanthobacter autotrophicus Py2, complete genomehydrogenase assembly chaperone hypC/hupF3e-0753.9
NC_013156:431795:455976455976456224249Methanocaldococcus fervens AG86, complete genomehydrogenase assembly chaperone hypC/hupF3e-0753.9
NC_007413:5742406:575924257592425759502261Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/formation protein (HUPF/HYPC)3e-0753.5
NC_003272:784437:803006803006803254249Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein4e-0753.5
NC_015958:141500:149898149898150140243Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF3e-0650.4
NC_010794:1673049:167419916741991674489291Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase metallocenter assembly protein HypC6e-0649.7
NC_013173:815696:841706841706841984279Desulfomicrobium baculatum DSM 4028, complete genomehydrogenase assembly chaperone hypC/hupF9e-0648.9